Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01010 ATGTCTAGCTCAGGTGTTACTTCTATGGCAATTTTAGCTGTTTATTATAGATTTTCATGGCAAATGGAGGTACATgTACTTCCTACGATCATATTTGGTAGTGGAGAGATTCCTTGGTCTGAAATGTTTGATACATTTGCCCTCTCGGTGTGTGCTACTGTGGGTATGGAGTTTTGGGCAAGATGGGCTCATAAGGCTCTATGGCATGCTTCATTGTGGCATATGCACGAGTCACACCATCGACCAAGAGAAGGTCCATTTGAGCTTAATGACGTTTTTGCAATAATTAATGTGGTCCCTGCTATTGCACTTCTCTCATTCGGTTTTTTTAACAAGGGATTACTTCCTGGACTCTGTTTTGGTGCAAGATCTTCATTGCCTTGCTTCTACGTGATAGCACCCAAGCCTATTCTATTTAAACAAGACCACATAAACTATAATCATACAGTCAACCGAACCAAAGCCAAAGCCAAAGCTAAATCCTATGCCCTTTGCTCCTTCGTCGACTCCACTCTAGAGCAATGCCATGACCCAATCGAGAGTCTTCCATGCAGATTCcttgaaagaaaaagagagCGTGCATTCCCGACATCAATGAAAAAACTTCCCCGTCCGAGAACAAGAGAAATTATTGGTCCCACCAAACTATGCCATGAACAATACAACAAGAGTATGGGATATTGA 684 0.4108 MSSSGVTSMAILAVYYRFSWQMEVHVLPTIIFGSGEIPWSEMFDTFALSVCATVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINVVPAIALLSFGFFNKGLLPGLCFGARSSLPCFYVIAPKPILFKQDHINYNHTVNRTKAKAKAKSYALCSFVDSTLEQCHDPIESLPCRFLERKRERAFPTSMKKLPRPRTREIIGPTKLCHEQYNKSMGY 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01010 227 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 1 123 IPR045019 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01010 Tsu-Chr4 9796134 9798512 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01010 1 129 Chloroplast and Mitochondria Gene Families AT4G25700 72.868 3.81e-63 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01010 K15746 - sind:105160437 210.305