Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00986 ATGGACAAATCTCATCAATTTTCTACTTCAATGATTGTTCGATCACTAAATGTGAAGAAAGATAATTTCATACCTcgagaagaggatgaagaaataATTGGTCTTGAATTACCTTTTCTAAGTGCAATTGGAGCACTAATTTACCTTGCTAATTATACAcatCCTCATAATGGTAGATCACAAACAGATTTTGGACCGGGCATTGAGGAAGTAGAATATGTTGAAGCAGCTTTTACTGTTTTGCAATACTTTTTTGCTTTCTCTGTTTCTGACTTCATGCCATGTTTGAGGGGTCTAGACTTGGATGGCCATGAGAAGATTATTAAGAAGGCTTGTAAGATCATGAAGAAATATCACGACCCTATAATTGATGATAGAATTCATGAATggaagaaagggaaaaaaacatataaagaaGATTTGCTTGATGTTCTTATCTCACTCAAATATGCTCACAAGAACGACCTTTTGACAACGCATGAGATTAAGTCTAATCTTTTGGAATTGACACTTGCAGCTGTTGATAATCCATCAAATGCAGTTGAATGGGGACTTGCTGAAATGATAAATCAGCCTGAGTTACTTAAAAAAGCTATTGAAGAATTATACAGTATAgttggaaaagaaagaatgGTGCAAGAATATGATTTTCCCAAACTCAACTATGTAAAAGCATGTGCTAGAGAAGCTTTTCGCCGTCATCCAATTTGTGATTTCAACCTTCCCCACGTTGCGATGAAAGACACCGTTGTTTCTAATTACTTTATCCCAAAAGAACGACGTCTCAAGATAGATGGATCTAATTTGAGTTTGACAGATTCGAGTTTGGAATTCGTAACATTTGGCACCGGAAGGCGTGGGTGTTCAGGTATCATGCTTGGATCTTCAATGACTATTATGTTATTTGCAAGGTTGCTCCATGGATTCACTTGGAGTGTGCCACCCAACCAATCTAGCATTGATCTCTCTGAATCTCATGGAGGTACCACAAAAGCTAAGCCACTTGTTGCAGTGGCAAAGCCAAGGTTACCAATAGAGGCTTATCGATTATACTAA 1056 0.3513 MDKSHQFSTSMIVRSLNVKKDNFIPREEDEEIIGLELPFLSAIGALIYLANYTHPHNGRSQTDFGPGIEEVEYVEAAFTVLQYFFAFSVSDFMPCLRGLDLDGHEKIIKKACKIMKKYHDPIIDDRIHEWKKGKKTYKEDLLDVLISLKYAHKNDLLTTHEIKSNLLELTLAAVDNPSNAVEWGLAEMINQPELLKKAIEELYSIVGKERMVQEYDFPKLNYVKACAREAFRRHPICDFNLPHVAMKDTVVSNYFIPKERRLKIDGSNLSLTDSSLEFVTFGTGRRGCSGIMLGSSMTIMLFARLLHGFTWSVPPNQSSIDLSESHGGTTKAKPLVAVAKPRLPIEAYRLY 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00986 351 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 259 347 - -
Tsu04g00986 351 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 259 347 - -
Tsu04g00986 351 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 58 259 - -
Tsu04g00986 351 PRINTS E-class P450 group I signature 288 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00986 351 PRINTS E-class P450 group I signature 278 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00986 351 PRINTS E-class P450 group I signature 161 178 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00986 351 PRINTS E-class P450 group I signature 181 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00986 351 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 58 259 - -
Tsu04g00986 351 SUPERFAMILY Cytochrome P450 69 342 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00986 351 Pfam Cytochrome P450 76 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00986 351 Gene3D Cytochrome P450 39 347 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00986 Tsu-Chr4 9354126 9355722 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00986 63 348 Cytochrome P450 AT4G39950 50.962 1.27e-107 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00986 - K12153 gmx:100809902 383.259