Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00981 ATGGGAAGCATTGAACTAGTTGAAAAACTAGTGATTGCACCTGAGCAACCAACACCTTCTAAGAGAATGTTTTTGTCAAATATTGATTTGTCACTAGTTGTTTACCAAGATTCTGCCTCTTTCTTTGATCCTCCAACCAACCAAATGTGTTTTTCTGAGATTTGTAGCAAATTATATAATTCACTTGGTAAAATGCTTGTGCATTATGGTTTTATGGCCGGCCGGCTTGTGCCGAGTTTGGAAGAGAAAAATCGATTTGAAATAGACTGTAATGATGCCGGtattgttgttgctgctgccaGAACCAATAGAAAGTTGTCTGATTTTGGTGTTATTTCAGCACCTAATCCAGAGTTAAAAGAATTGGTTGTTTTCTTGCTTGAAGAGGGTGATGAAGAAACTCAGGACCTTAAAGAATTTCCACTTGCTTCCTTACagCTTACACAATTTGGATGTGGAAGTTTAGCACTAGCTTCTCATTACAACCATTGCATACTCGACGGTATAGGAGTAAGAGAATTCGAGGCGAATTTGGCATCTCTAACACGCGGTGACGACTTCATCGTAGTACCTAATGCAGACAGAACACTACTAAGAGCTAGAAACCCACCAAAAATAAGTCATCCACATTTTGAATACTCAAAATCTACAAACACAGAAAACTTGTTCACGATACGCGGAACAACTAGCACCAATGTTAAAAAAACCTTTGTAGAGAATCAAATTCATGTACTTAATTTATCACCACAAAAAATTGCAACCTTAAAAAAGAAAGCATTAGAGAACACAACATTAAAAAACATCACAACATTTCAAGTTGTTGCTGCAAAAATATGGAAAGCAAGAAGCATAGCGACAAATATGGCCGAGGAAAAAGTGTCAACAATGTTGTTTCCTGTCGATGTTAGAAAAAAGGTTATTCCCGAACTTCCAAACGGGTTTGCAGGCAATGCATTAGTTCCTGGATTTGCAAGAGCAACTGTTAAGGAACTTATGGAACTAGAAGATGATTTCATTATACGGAAAGTGCAAGAAGGGATCGAAAGATTGAATGATGAGTATATTAAATCAGGTATAGATTGGTTAGAATTGAATAGAGGTGTGCCTTGTAAAGAAGATAGTTTCTCTTTGGTGGCATGGTGGAGATTGGGATTAGAGAGTGAAATATTTGCTTGGGGTAGATTGAAATGTGCTACTCCACTTATAGTTAAGCCTGGTTTGGTTATGCTGTTGCCAGGGGCAAAGGATGAAGGGGGCATTAATATATGTTTGAGTTTACCTAAAGATCAATTGCAAGAGTTTTGTAGGATAATGCTAGAAACTTAG 1326 0.368 MGSIELVEKLVIAPEQPTPSKRMFLSNIDLSLVVYQDSASFFDPPTNQMCFSEICSKLYNSLGKMLVHYGFMAGRLVPSLEEKNRFEIDCNDAGIVVAAARTNRKLSDFGVISAPNPELKELVVFLLEEGDEETQDLKEFPLASLQLTQFGCGSLALASHYNHCILDGIGVREFEANLASLTRGDDFIVVPNADRTLLRARNPPKISHPHFEYSKSTNTENLFTIRGTTSTNVKKTFVENQIHVLNLSPQKIATLKKKALENTTLKNITTFQVVAAKIWKARSIATNMAEEKVSTMLFPVDVRKKVIPELPNGFAGNALVPGFARATVKELMELEDDFIIRKVQEGIERLNDEYIKSGIDWLELNRGVPCKEDSFSLVAWWRLGLESEIFAWGRLKCATPLIVKPGLVMLLPGAKDEGGINICLSLPKDQLQEFCRIMLET 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00981 441 Pfam Transferase family 3 434 - -
Tsu04g00981 441 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 440 - -
Tsu04g00981 441 Gene3D - 2 215 IPR023213 -
Tsu04g00981 441 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE-LIKE ISOFORM X1 3 440 - -
Tsu04g00981 441 Gene3D - 226 438 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00981 Tsu-Chr4 9330504 9332176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00981 4 440 Monolignol Biosynthesis Gene Families AT5G48930 25.885 2.99e-53 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00981 K15400 - gmx:100801822 706.827