Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00978 ATGACCTACAAATCATTAGAAGAAGCAATAAGTTGCACCCAAACTCATCAATTAGAAGAAGCAAGTTGCACCCAAACTCAACAATCCTCTGTTAGAGAAGTTTTATCTATCATTTGTGTAGTTCTCTCTGTTCTTATTTTCTTTGGCCTACTTATTGGCCTACCTATCCTCCTTACGCCGCCTCGGACCAAGTTCAGCATAGCTGAAGCCTCAATCATGCATTTTAACCTCACAAGCAACAACactttatattataattttaaggtCACCATTACATTAAAAAACTTCGATAGCACCATAGAATCTTATGATAAGGTTACTGCAATTGCTTCGTATAAAGGTAATCAATTAGCTTCGGTGAAAATGGAACCTTTTAAGTTAAGTGGTAAGAATATTGTTAGGCTTCAGCCCATAGTGTTTGAAGGGAATAATGTGATGATATTCGAGCCTCAACAACTTGCTAAGTATAATAAGGAGACACAATTGAAGATTTATAACTTAGATTTGGACTTAGATTTGGATGACTTTAGAACTCATATTCATTGTCCAAATTTTAGAGTTCCTTTGATTTCCAATGGTAAAGTAGCACCTACTTTCAATGTCACCACATGCTCATACAAGGATGATCATTGA 633 0.3507 MTYKSLEEAISCTQTHQLEEASCTQTQQSSVREVLSIICVVLSVLIFFGLLIGLPILLTPPRTKFSIAEASIMHFNLTSNNTLYYNFKVTITLKNFDSTIESYDKVTAIASYKGNQLASVKMEPFKLSGKNIVRLQPIVFEGNNVMIFEPQQLAKYNKETQLKIYNLDLDLDLDDFRTHIHCPNFRVPLISNGKVAPTFNVTTCSYKDDH 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00978 210 PANTHER OS05G0367900 PROTEIN 44 206 IPR044839 GO:0098542
Tsu04g00978 210 PANTHER HARPIN-INDUCED 1 44 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00978 Tsu-Chr4 9310354 9310986 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00978 64 190 SNARE and Associated Proteins AT1G32270 28.906 6.39e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00978 - - lja:Lj4g3v0630970.1 116.701