Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00968 ATGCTTCAAATCCAAGGCTACTTAGTATTATTCCTTTTATGGTTCATTTCAACAATTTTCATTAGGTCACTTTTCAAAAAATCTGAGTATTATAAATTACCACCTGGTCCCCCAATTTCAGTACCAATCTTAGGACATGCACCATATCTTAGATCACTTCTtcataaatcactttacaaacTTTCAATTCGTTATGGCCCTTTAATGCATATTATGCTTGGTTCACAACATGTCATAGTTGCATCATCAGCTGAAAGTGctaaacaaattttgaaaacttgtgAAGAGTCTTTCATCAATAGACCAATTATGATTGCTAGTGAGAATTTAACATATGGTGCAGCTGATTATTTTTTCATACCTTATGGTACTTATTGGAGGTTTCTTAAGAAGCTCTGTATGACAGAGCTTCTTAGCGGGAAAACTCTCGAACACTTTGTTAGTATTCGTGAGGATGAAATTAAGTGTTTTTTAGGCACCATTTTGGAAATATCTAAAAGTGGTAAACCTATTGAAATGAGGCATGAACTTATTAGACATACTAATAATATCATTTCTAGAATGACTATGGGAAAAAAGAGTAATGGTATGAATGATGAAGTTGGTGAGTTGAGAAAAGTGATTAGAGAAATTGGTGAACTTCTTGGTGCATTTAATTTGGGTGATATTATTGGATTTATGAGACCTTTTGATTTACAAGGATTTGGAAAAAGGAATAGAGATACACATCATAAGATGGATTTGATGATGGAGAAAGTGTTGAAGGAACATGAAGAGGTTAGAGCTAAAGAAAGTGTTGGTAGTGATAGGAAGAAGGATCTGTTTGATATTTTGTTGAACTTGATTGAAGCTGATGGAAGTAAACTCACTAGACAAAGTGCTAAAGCTTTTGCTCTGGACATGTTCATTGCAGGAACAAATGGACCAGCAAGTGTGTTAGAATGGGCACTAGCAGAACTAATAAGAAATCCACATGTTTTCAAGAAAGCAAGAGAAGAAATTGATTCTGTTGTTGGCAAAGAAAGACTTGTTAAAGAATCAGATATACCAAATTTACCTTATCTTCAAGCAGTTGTTAAAGAAACTCTTAGAATGCATCCACCAACTCCAATATTTGCAAGAGAAGCTATAAGAAGTTGTCAAGTTGATGGATATGATGTACCTGAACATTCAAAGATTTTCATCAATGCATGGGCTATTGGTAGAGATCCTAACTATTGGGACAATCCATTAGTCTATGACCCTGAAAGATTCTTCATCAGTGATGATCCTAGTAAGAGTAAAATTGATGTTAGAGGACAATATTATCAACTTTTACCATTTGGTAGTGGGAGAAGAAGTTGTCCTGGTGCTTCACTTGCTTTACTTGTTATCCAAGCAACACTTGCTAGTTTGATACAATGCTATGATTGGGTTGTTAATGATGGTAAGAGTCATGATCTTGATATGTCTGAGGTTGGAAGGGTTACTGTGTTTTTGGCAAAACCACTTAAGTGCAAGCCTGTTCCACATTTTGTTCCATTCTCTGCTTGA 1533 0.3425 MLQIQGYLVLFLLWFISTIFIRSLFKKSEYYKLPPGPPISVPILGHAPYLRSLLHKSLYKLSIRYGPLMHIMLGSQHVIVASSAESAKQILKTCEESFINRPIMIASENLTYGAADYFFIPYGTYWRFLKKLCMTELLSGKTLEHFVSIREDEIKCFLGTILEISKSGKPIEMRHELIRHTNNIISRMTMGKKSNGMNDEVGELRKVIREIGELLGAFNLGDIIGFMRPFDLQGFGKRNRDTHHKMDLMMEKVLKEHEEVRAKESVGSDRKKDLFDILLNLIEADGSKLTRQSAKAFALDMFIAGTNGPASVLEWALAELIRNPHVFKKAREEIDSVVGKERLVKESDIPNLPYLQAVVKETLRMHPPTPIFAREAIRSCQVDGYDVPEHSKIFINAWAIGRDPNYWDNPLVYDPERFFISDDPSKSKIDVRGQYYQLLPFGSGRRSCPGASLALLVIQATLASLIQCYDWVVNDGKSHDLDMSEVGRVTVFLAKPLKCKPVPHFVPFSA 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00968 510 SUPERFAMILY Cytochrome P450 34 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00968 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Tsu04g00968 510 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 2 509 - -
Tsu04g00968 510 Gene3D Cytochrome P450 25 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00968 510 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00968 510 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00968 510 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00968 510 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00968 510 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00968 510 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00968 510 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00968 510 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00968 510 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00968 510 PANTHER BETA-AMYRIN 24-HYDROXYLASE 2 509 - -
Tsu04g00968 510 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00968 510 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00968 510 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00968 510 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00968 510 Pfam Cytochrome P450 34 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00968 Tsu-Chr4 9226024 9229483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00968 1 502 Cytochrome P450 AT5G06900 39.764 7.26e-132 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00968 K24188 K15814 gmx:100037459 857.825