Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00946 ATGTGTAGAAAAGTGCTCACTGATGATGTGAACTTTAAGCTTGGTTATCCAAACTCCATCAAAGAGTTGACAAAAGGTAAGCATGATGCCTCTAATTCAGAACATAAGCAATTCCGAAGACAAATTATTGCTCCCATTGTTGGTCACAAGGCACTAGCAATGTACTTAGAACGTATAGAGGATATTGTGATCAATTCCTTGGAAGAATTATCAAGCATGAAGCACCCTATTGAGTTATTGAAAGAGATGAAAAAGGTTTCTTTTAAAGTTATTATCCATGTTTTCTTGGGTTGTAATCAAGACATTGTTAAAAACATTGCAAGTTTAAGTAATGATTTGTATAATGGACTGTTCTCTATTGCCATCAATGCACCTGGTTTTGCTTTCAACAAAGCACTCAAGGCACGCAAGAAGATAGCCAAAATACTTCAACCAATTGTGGATGAAAGaagattgatgataaaaaatggtCAACAAGTGGGAGAGAAAAAGGATCTTTTAGATATTCTCTTGGAAGTCAAAGATGAGAATGGTAGAAATTTTGAGGATGAAGATATTAGTGACCTATTGATGGGACTTTTAGTTGCTGGACATGAATCTACAGGAACTGCTCTAATGTGGTCAATTATATATCTTACCCAACATCCACATATTCTTAAAAAAGCAAAGGAAGAGCAAGAAGAAATCTTGAGGACAAGATCATCGTCCGAAAAACAATTGAGTCTTACCGAAGTCAAGCAAATGGTTTACCTTTCTCATGTGATCGATGAAATGTTGAGATGTGCCAACGTGGCCTTTACAATTTTCCGAGAGGCAACATCTGATGTCATCATCAATGGTTATCTCATACCAAAAGGATGGAGAGTGCTAATATGGACGAGAGCTATTCATATGGATTCTGAATATTACCCAAATTCAAAAGAGTTTAATCCATCAAGATggaatGAATACACTGTCAAGGCAGGAACCTTCCTTCCTTTTGGGGGAGGAAGTAAGTTATGTCCTGGAGCTGACTTAgcaaaacttcaaatttttgtATTTCTTCATTATTTCCTCCTTAATTACAGGTTGGAGCGAATAAATCCAAAATGTCCAATTACTTACTTACCGGTACCTACGCCTATTGACAAGTGTCTCGCTAAAGTGATAAAGGTTTGA 1158 0.3549 MCRKVLTDDVNFKLGYPNSIKELTKGKHDASNSEHKQFRRQIIAPIVGHKALAMYLERIEDIVINSLEELSSMKHPIELLKEMKKVSFKVIIHVFLGCNQDIVKNIASLSNDLYNGLFSIAINAPGFAFNKALKARKKIAKILQPIVDERRLMIKNGQQVGEKKDLLDILLEVKDENGRNFEDEDISDLLMGLLVAGHESTGTALMWSIIYLTQHPHILKKAKEEQEEILRTRSSSEKQLSLTEVKQMVYLSHVIDEMLRCANVAFTIFREATSDVIINGYLIPKGWRVLIWTRAIHMDSEYYPNSKEFNPSRWNEYTVKAGTFLPFGGGSKLCPGADLAKLQIFVFLHYFLLNYRLERINPKCPITYLPVPTPIDKCLAKVIKV 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00946 385 Gene3D Cytochrome P450 2 384 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00946 385 PANTHER CYTOCHROME P450 88D6 1 363 - -
Tsu04g00946 385 PRINTS E-class P450 group I signature 324 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00946 385 PRINTS E-class P450 group I signature 205 231 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00946 385 PRINTS E-class P450 group I signature 185 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00946 385 PRINTS E-class P450 group I signature 292 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00946 385 PRINTS E-class P450 group I signature 334 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00946 385 Coils Coil 219 239 - -
Tsu04g00946 385 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 327 336 IPR017972 GO:0005506|GO:0016705
Tsu04g00946 385 Pfam Cytochrome P450 30 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00946 385 PRINTS P450 superfamily signature 253 264 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00946 385 PRINTS P450 superfamily signature 325 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00946 385 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00946 385 PRINTS P450 superfamily signature 196 213 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00946 385 PANTHER CYTOCHROME P450 26 1 363 - -
Tsu04g00946 385 SUPERFAMILY Cytochrome P450 28 370 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00946 Tsu-Chr4 9071864 9074764 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00946 2 385 Cytochrome P450 AT2G32440 49.871 4.41e-131 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00946 K04123 - ag:BAG68929 604.364