Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00930 ATGGCTGCAAATTTCTGGGCATCATCACATTATAAGCATCTCCTGGATCAAGAAGAAGTGGATATGGTGAATCCACTTGACAAAGAAAAGGGTGTCACACTTGAGGATTTTAAGCTTATCAAGATGCATATGTCCAATTATATTTTGAAATTGGCTCAACAAGTAAAAGTGAGGCAGAGGGTTGTTGCTACTGCAGTTACATACATGAGGCGTGTTTACACAAGGAAGAGTATGACAGAATACGATCCACGCCTCGTAGCTCCAGCCTGCTTGTACCTTGCATCAAAAGCCGAAGAAAGCACAGTGCAAGCTAGGCTACTTGTATTTTACATTAAGAAATTATACGCTGATGATAAGTATAGGTATGAAATCAAGGACATACTTGAAATGGAGATGAAGATTTTAGAAGCATTGAACTATTACTTGGTTGTATTCCACCCCTACCGTTCCCTCTCCGGGTTGCTTCAGGATGCAGGTCTGAATGATCTAAGCATGACTCAACTAACTTGGGGGCTTGTTAATGACACATACAAGATGGACCTAATGCTTGTACATCCACCACATCAGATTGCTTTAGCATGCATATACATTGCTAGTGTGCTCAGGGAGAAAGACACCACTGTCTGGTATGAAGAACTTCGTGTTGATATGAACGTGATTAAGAACATATCAATGGAGATacttgatttttatgaaaacaacAGAATGTTCACTGATGAGAGAATCAATGCTGCTCTCCAGAAGCTATGA 750 0.396 MAANFWASSHYKHLLDQEEVDMVNPLDKEKGVTLEDFKLIKMHMSNYILKLAQQVKVRQRVVATAVTYMRRVYTRKSMTEYDPRLVAPACLYLASKAEESTVQARLLVFYIKKLYADDKYRYEIKDILEMEMKILEALNYYLVVFHPYRSLSGLLQDAGLNDLSMTQLTWGLVNDTYKMDLMLVHPPHQIALACIYIASVLREKDTTVWYEELRVDMNVIKNISMEILDFYENNRMFTDERINAALQKL 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00930 249 PIRSF Cyclin_C_H_G 1 249 - -
Tsu04g00930 249 SUPERFAMILY Cyclin-like 146 241 IPR036915 -
Tsu04g00930 249 CDD CYCLIN 43 135 IPR013763 -
Tsu04g00930 249 Gene3D - 19 143 - -
Tsu04g00930 249 PANTHER CYCLIN-C1-2-LIKE ISOFORM X1 4 247 - -
Tsu04g00930 249 SMART cyclin_7 149 229 IPR013763 -
Tsu04g00930 249 SMART cyclin_7 46 136 IPR013763 -
Tsu04g00930 249 Gene3D - 8 240 - -
Tsu04g00930 249 Pfam Cyclin, N-terminal domain 43 142 IPR006671 -
Tsu04g00930 249 SUPERFAMILY Cyclin-like 4 144 IPR036915 -
Tsu04g00930 249 PANTHER CYCLIN 4 247 IPR043198 GO:0006357|GO:0016538
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00930 Tsu-Chr4 8890770 8899526 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00930 60 199 Core Cell Cycle Gene Families AT5G27620 30.000 8.74e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00930 K15161 - gmx:100784345 454.521