Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00902 ATGAATTACGGCACCGAAACATTGGATTTCAGAAACCTTAAGGTAATCTCCGCCGTTGGACGCGGTGCAAAGGGTATCGTGTTTCTAGCGAGAACCTATAATGGATCATCGAAAGATGAATGGTGGGCTTTGAAAGTTATATCAAAAGAACTTCTtcagaagaaaaataataacaaaactgGTGAATGCAAAAGGGTTAGATTTGAACAACAAATACTACGTCGTTTTGATCATCCTCTTTTACCACGGTTAAAAGGTGTTCTTGAAACTGAGAAACTTATTGGATTTGCTATTGATTATTGTCATGGTGGTAATTTACATTCTCTTATGAAGAAACAACCGGAGAAAAAATTCTCTGAAGAAGCCGTTAGGTTCTATGCTGTGGAATTGGTGTTAGCATTGGAGTATTTACACAAATTAGGAGTAGTTTATAGAGATTTGAAGCCTGAGAACATCATGATTCAACAAACGGGTCACATAATGATCGTAGATTTCGACTTATCAAAGAAATTGAATGCAAAATCAGCAAACTCGAGTTGTAACTCTTCACCAGGTTCCAAATCTCCAGATATAAACACAAGAAAAATGAGATGGTTATCGAAGCTCTATTTTCATTGTGGTTCTGGGTTACCAAAATATGACACAGTGAATCAACTCGATTTTAACACGCCATTTAGAAGGAGCGAATCAGACTCAGTTGAAAAGTCAAACTCGTTCGTGGGAACCGAGGATTACGTGGCACCTGAAGTTATTTTAGGTCATGGACACAACTTGAGTGTTGATTGGTGGTCATTCGGTGTTGTTTTGTATGAATTATTTTATGGAACGACACCGTTTAATAGTGCTAATAGAAAGGAAACATTTCACAAGATTTTAAACGAGGATCCTGAACAAAAAGGTGAAATGACTctgttgaaagatttgattgcTAAATTGCTTGAGAAAGATCCTGACCGTAGGATTCAAGTTGATGAAATAAAAAGCCATGATTTCTTTAAAGGTGTGCAGTGGGATACGGTATTGGAAATTGCACGTCCACCATATATTCCTCGGAATGAAATTGTGGATAAACCTGGGTTTTGTAGAAAAGATGTTGAGAGTTTTGTCCATGgaatattttttccaaaaaataaaaatgataatggtgagaaagagaaaaataaggaggaggtaaaaaaagaagatggaaaggaaaaggaaaaagagaaGGGGAATGTGAACGATGATAGTACTAATAATAAGAATGTGTGGGTTGAAAAGTTGAGTCAGAATCAGACTAAGAATGAtaactttttgattttttaa 1305 0.328 MNYGTETLDFRNLKVISAVGRGAKGIVFLARTYNGSSKDEWWALKVISKELLQKKNNNKTGECKRVRFEQQILRRFDHPLLPRLKGVLETEKLIGFAIDYCHGGNLHSLMKKQPEKKFSEEAVRFYAVELVLALEYLHKLGVVYRDLKPENIMIQQTGHIMIVDFDLSKKLNAKSANSSCNSSPGSKSPDINTRKMRWLSKLYFHCGSGLPKYDTVNQLDFNTPFRRSESDSVEKSNSFVGTEDYVAPEVILGHGHNLSVDWWSFGVVLYELFYGTTPFNSANRKETFHKILNEDPEQKGEMTLLKDLIAKLLEKDPDRRIQVDEIKSHDFFKGVQWDTVLEIARPPYIPRNEIVDKPGFCRKDVESFVHGIFFPKNKNDNGEKEKNKEEVKKEDGKEKEKEKGNVNDDSTNNKNVWVEKLSQNQTKNDNFLIF 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00902 434 SMART serkin_6 13 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g00902 434 MobiDBLite consensus disorder prediction 409 434 - -
Tsu04g00902 434 Gene3D Phosphorylase Kinase; domain 1 13 104 - -
Tsu04g00902 434 MobiDBLite consensus disorder prediction 376 434 - -
Tsu04g00902 434 PANTHER SERINE/THREONINE-KINASE OXI1-LIKE PROTEIN 6 401 - -
Tsu04g00902 434 ProSiteProfiles Protein kinase domain profile. 13 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g00902 434 Pfam Protein kinase domain 15 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g00902 434 Pfam Protein kinase domain 234 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g00902 434 Gene3D Transferase(Phosphotransferase) domain 1 105 193 - -
Tsu04g00902 434 Gene3D Transferase(Phosphotransferase) domain 1 231 351 - -
Tsu04g00902 434 MobiDBLite consensus disorder prediction 377 408 - -
Tsu04g00902 434 PANTHER FLIPPASE KINASE 1-RELATED 6 401 - -
Tsu04g00902 434 SUPERFAMILY Protein kinase-like (PK-like) 12 355 IPR011009 -
Tsu04g00902 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00902 Tsu-Chr4 8621153 8623100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00902 7 381 AGC Kinase Gene Family AT4G13000 55.053 7.65e-134 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Tsu04g00902 Pkinase 2.6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00902 K20714 - gmx:100813693 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g00902 04 8621153 8623100 Tsu08g00261 08 2303239 2305200 PCT