Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00866 ATGCTATTCTTTTTTTCAACCTTTAAGTTCATAAAGCTTTTTGCAATATGTTTTGGTGCATTCATAATGGCCTCTTCTACTCATGTTGTTAATTCTTCAATGACTATTCCATCATCTTCAACCATCAATGAAAGAATTAGAGAAGCACGTTCATTGTTGAAGTGGAAAAGCAACCTTGAAATGAAAAGCCAAACTTTGTTATCTTCATGGGCAGGTAACAATTCATGCAACTGGCTAGGAATTACATGTGATGAAGATTACAAATTTGTGTCCAATGTAAATCTCACAAATATGAGATTAAGAGGTACACTTGAAACTCTTAACTTCTCATCACTTTCAAATATCATCACTCTTAATCTTAGTAACAACTTCTTGAATGGACATATTCCGCCCGATATCGGGGTGTTGTCCAAACTATACCATCTTGATCTTAGTAACAATGATCTTACAGGAACAATCCCATATGAAATAACAAAGTTGACCAatcttcatattttatatttagataACAATATTTTCAATGGTTTCATTCCTAATGAAATAGGTGCATTAAGAAATCTAAGAAAACTTAGTATTTCGTATGCGAATTTCACCGGGACTATTCCAATTTCGATCGGAAACTTAGGATTCTTGTCACACTTGTATCTAGGAGGCAACAACCTTATAGGAAACATACCAAAAGAAATTTGGAATTTGACTAACTTAAAGTACTTAGCAGctgaaaaaaacaaattcaatggTTCTATAATTTCCCAAGATGTTGTAAACTTGCATAATCTAGAAACTCTAGATCTCAGCAATAGTGATATTTCCATTATTGGTCCTATCCTTAAAGACTTATGGAAGTTGAAAAATTTGACATACCTTTCTCTTTCACTTTGCAAAGTCAAAGGACATATTCCATTTTCTATAGGAAAGTTGGATAACTTAGTGTATCTAAATTTAGCAAATAACCAAATTTATGGCCACATTCCTAAGGAAATTGGTAAGTCATTGAACCTaaaatttctatttctttctatgAACAACTTATCAGGCACTATACCTGTGGAAATTGGGAAATTGATCAACATGAAACATTTAAGACTTAATGACAATAGTCTTTCTGGTTTCATTCCTCATGAAATTGGAATGATGAGAAACTTGGTTGATATTAATTTGTCAAATAACACTTTATCAGGTAAAATTCCACCTACAATTGGAAACTTGAGCAAGTTACAAAATCTTACCATATTTTCAAACCATCTCACTGGACCACTTCCTACAGAAATCAACATGCTTTTCAATTTGgaagtttttttaatatttgataacaATTTTATTGGTCAGCTCCCACATAATATTTGCATTGGTGGAAAGTTGAAATTCTTTTCTGTTTTGGAAAACCACTTCTCTGGTCCTGTTCCAATGAGTTTGAAGAATTGCTCTAGCATTGTAAGAATTAGGCTTGAACAAAACCAACTTTCTGGAAATATAACAAATTACTTTGGTGTGTATCCAAATTTGTACTACATGCAGTTAAGTGGAAATAAGTTTTATGGCCACGTTTCACCAGACTGGGGAAAATGTCGAAGCTTGGCGATCCTTAACATCTCCAATAATAACATATCAGGTGGTATACCGCCAGAACTAGGCGAGGCAACCAATTTATATTCACTTGACTTATCTTCAAACTACCTCATAGGAAAAATTCCGAAGGAGTTAGGCAACTTGAGTTCATTGTCCAGACTCTTGATCAGCAATAACCGTCTTTCAGGAAACGTTCCTTTAGAAATAACATCACTAAAGGAACTTGAGACGTTAAATCTTGCGGAAAATGATCTAAGCGGCTATGTCGCAAAACAACTTGGATATTTTCCTAGACTATTGAACATGAATTTGAGCCATAACAAATTTATAGGAAATATTCCTATTGAGTTTGGCCAATTTAAAGTCATTCAAAGTCTTGATCTTAGTGGGAATTTTTTCGATGGAACAATACCGTTAACACTTGCACAACTGATATTTTTAGAGTCATTGAATATATCACATAATAACCTTGTTGGATTTATTCCCCCAAACTTTGATCACATGCTCAGCTTGTTATCTGTTGACATATCATATAACCAATTCGAGGGTCCGATTCCAAACATTCCGGCTTTCCATAAAGCTACAATTGAAGTTTTGAGAAATAATAAAAGATTGTGTGGTAATGTCTCTGGCTTGGAGCCTTGCGCAACATCAAGCGGTACTCAATCTCATAATCATAAGATCAATAAAGTCTTATTGATAATTTTACCCCTTGCAATGGGAACTCTAGTACTAGTATTAGTTTGTTTCAAATTCTCTAATCATTTCTGCAAAACTTCAATCACAAGAGAATATCTAGCTCGAGGGAACGTTATTGATACTCAAAACCTATTTACCATATGGAGTTTTGATGGAAAAATGGTGTATGAGAATATTATTGAAGCCACAGAAGATTTCGATGATAAACATCTCATCGGAGTTGGAGGTCATGGAAGTGTTTACAAAGCGGAATTAGACACAGGTCAAGTAGTTGCTGTGAAAAAACTCCATTCAGTAGTAGATGAAGAAAATTCCAACCTAAAATCTTTCACAAGTGAGATCAAAGCTCTGACAAAAATTAGACACCGTAACATTGTAAAGCTACATGGATTTTGTTTACATTCTCGAGCCTCGTTTTTGGTCTACGAATTCATGGAAAAAGGAAGTCTAGATAACATTTTAAAAGATGATGATCAAGCAATTGCATTTGACTGGAATAAAAGAGTGAATGTCATTAAAGATATAGCTAATGCTTTATGTTATATGCATCATCATTGCTCGCCTCCAATTGTTCATCGAGATATATCAAGCAAGAATATACTTCTAAATTTGGAATATGTAGCTCATGTCTCTGACTTCGGAATAGCTAAGCTTCTTAATCCTAACTCAACCAACTGGTCCTCATATGCAGGAACCTTTGGATATGCTGCTCCAGAATATGCATACACAATGAAAGTGAATGAGAAATGTGATGTGTATAGTTTCGGGGTCTTAGCATTGGAAATACTTTTTGGAAAACACCCTGGAGGTTTTATATATCATTCCTTACTATTACCTTTGTGGAAAATTATGGGCAACATACTTGATGATATGGCGTTGACGGATAAGTTGGATAAACGTCTCCCACAGCCTTTGAATCCTTTTGTGAACGAGTTAGTATCGATTGCAAGGATAGCTATTGTCTGCTTGACTGAAAGCTTACATTCTCGCCCTACTATGGAGCAGGTCACCAAAGAACTTGCAATGTCATCTTTGTCTACAATGGGTTAG 3318 0.3412 MLFFFSTFKFIKLFAICFGAFIMASSTHVVNSSMTIPSSSTINERIREARSLLKWKSNLEMKSQTLLSSWAGNNSCNWLGITCDEDYKFVSNVNLTNMRLRGTLETLNFSSLSNIITLNLSNNFLNGHIPPDIGVLSKLYHLDLSNNDLTGTIPYEITKLTNLHILYLDNNIFNGFIPNEIGALRNLRKLSISYANFTGTIPISIGNLGFLSHLYLGGNNLIGNIPKEIWNLTNLKYLAAEKNKFNGSIISQDVVNLHNLETLDLSNSDISIIGPILKDLWKLKNLTYLSLSLCKVKGHIPFSIGKLDNLVYLNLANNQIYGHIPKEIGKSLNLKFLFLSMNNLSGTIPVEIGKLINMKHLRLNDNSLSGFIPHEIGMMRNLVDINLSNNTLSGKIPPTIGNLSKLQNLTIFSNHLTGPLPTEINMLFNLEVFLIFDNNFIGQLPHNICIGGKLKFFSVLENHFSGPVPMSLKNCSSIVRIRLEQNQLSGNITNYFGVYPNLYYMQLSGNKFYGHVSPDWGKCRSLAILNISNNNISGGIPPELGEATNLYSLDLSSNYLIGKIPKELGNLSSLSRLLISNNRLSGNVPLEITSLKELETLNLAENDLSGYVAKQLGYFPRLLNMNLSHNKFIGNIPIEFGQFKVIQSLDLSGNFFDGTIPLTLAQLIFLESLNISHNNLVGFIPPNFDHMLSLLSVDISYNQFEGPIPNIPAFHKATIEVLRNNKRLCGNVSGLEPCATSSGTQSHNHKINKVLLIILPLAMGTLVLVLVCFKFSNHFCKTSITREYLARGNVIDTQNLFTIWSFDGKMVYENIIEATEDFDDKHLIGVGGHGSVYKAELDTGQVVAVKKLHSVVDEENSNLKSFTSEIKALTKIRHRNIVKLHGFCLHSRASFLVYEFMEKGSLDNILKDDDQAIAFDWNKRVNVIKDIANALCYMHHHCSPPIVHRDISSKNILLNLEYVAHVSDFGIAKLLNPNSTNWSSYAGTFGYAAPEYAYTMKVNEKCDVYSFGVLALEILFGKHPGGFIYHSLLLPLWKIMGNILDDMALTDKLDKRLPQPLNPFVNELVSIARIAIVCLTESLHSRPTMEQVTKELAMSSLSTMG 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00866 1105 SUPERFAMILY L domain-like 462 730 - -
Tsu04g00866 1105 Gene3D Ribonuclease Inhibitor 46 199 IPR032675 -
Tsu04g00866 1105 Gene3D Ribonuclease Inhibitor 611 739 IPR032675 -
Tsu04g00866 1105 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 283 1102 - -
Tsu04g00866 1105 SMART LRR_typ_2 307 331 IPR003591 -
Tsu04g00866 1105 SMART LRR_typ_2 208 232 IPR003591 -
Tsu04g00866 1105 SMART LRR_typ_2 379 403 IPR003591 -
Tsu04g00866 1105 SMART LRR_typ_2 112 136 IPR003591 -
Tsu04g00866 1105 SMART LRR_typ_2 667 690 IPR003591 -
Tsu04g00866 1105 SMART LRR_typ_2 257 280 IPR003591 -
Tsu04g00866 1105 SMART LRR_typ_2 160 184 IPR003591 -
Tsu04g00866 1105 SMART LRR_typ_2 427 451 IPR003591 -
Tsu04g00866 1105 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 188 292 - -
Tsu04g00866 1105 Pfam Leucine rich repeat N-terminal domain 48 84 IPR013210 -
Tsu04g00866 1105 SUPERFAMILY RNI-like 92 417 - -
Tsu04g00866 1105 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 188 292 - -
Tsu04g00866 1105 ProSitePatterns Tyrosine protein kinases specific active-site signature. 946 958 IPR008266 GO:0004672|GO:0006468
Tsu04g00866 1105 Gene3D Phosphorylase Kinase; domain 1 788 900 - -
Tsu04g00866 1105 Pfam Protein kinase domain 823 1094 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g00866 1105 ProSiteProfiles Protein kinase domain profile. 822 1098 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g00866 1105 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 283 1102 - -
Tsu04g00866 1105 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 39 188 - -
Tsu04g00866 1105 Gene3D Ribonuclease Inhibitor 506 610 IPR032675 -
Tsu04g00866 1105 Gene3D Ribonuclease Inhibitor 200 250 IPR032675 -
Tsu04g00866 1105 ProSitePatterns Protein kinases ATP-binding region signature. 828 851 IPR017441 GO:0005524
Tsu04g00866 1105 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 39 188 - -
Tsu04g00866 1105 SUPERFAMILY Protein kinase-like (PK-like) 796 1096 IPR011009 -
Tsu04g00866 1105 Gene3D Transferase(Phosphotransferase) domain 1 901 1103 - -
Tsu04g00866 1105 Gene3D Ribonuclease Inhibitor 251 498 IPR032675 -
Tsu04g00866 1105 Pfam Leucine Rich Repeat 670 690 IPR001611 GO:0005515
Tsu04g00866 1105 Pfam Leucine Rich Repeat 549 571 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00866 Tsu-Chr4 8316763 8320170 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00866 33 994 Receptor kinase-like Gene Family AT4G08850 40.802 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tsu04g00866 Pkinase 2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00866 - - mtr:MTR_7g045710 1348.57