Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00839 ATGTCCTTCAATCAATCAAAGTCCGATAAGAGTGACACCGCGTACCGACGAACCGGTCGATCAACCAGCTTCAATCAGCAGCGAGGTAACACCGGTGGTGGTTCATACGTTAAGGCCGGCACCGGCGCCGCCGCGCCTTCACCCTCACTCTCTTCTTCTCGGAGTTTTAACAAGAAGTCTAATAATCATGCACAAGGTGGACCATCTAGGGTAAACCCTACCCAGGCGAATTCAGCCGAGTCTAATTATGCTTCTGCAGTGCGAGCAACACCGAATGGTTCCCATGTACAGCCGCATTTTCATGGAGGGTCTGATGCATCAGTTACAAATGCAACTGCCAAGCCATCCGAATCATCAGCTGCACAGAGGATCACCAGAGCTGTTCCTAAAGCTCCTATTTCTCAACCTCCCCCCGTGAGTTCTGATTCAGCAGCACCTAGAACCCCTGCTAAGGGAGATGCATCCAAAGCATTCCCTTTCCAATTTGGATCTATTAGTCCTGGCATTGTGAATGTAATGACAATTCCTGCTCGCACAAGCTCGGCTCCTCCTAATATAGATGAGCAAAATCGTGATCAGGCTCGTCATGATTCTCTAAGGCCTGTGCCTTCTGTGCCAACACCTACTGTTCCAAAGCAGCTGCCAGCGAAAAAGGATACAGGTGTCGCTGACCAATCTAAGGTTGGGGAGACTCATACTGGTACAAGGGCAAAAAAGGATACACATGTGTCACCTTTACCCCCAGCAAGCCTTATGCAGAATCATTCTGTTGTTCCTCTGACTGGAATGTCAATGCCAATGCAATATCACCACCAGTCACAGGCACCCATGCACTTCAGTGCTGCTAATCCACAAATTCAATCTCATGGTATGTCTACAGCACCTCATCAGATGCCTTTACAAATGCCTTTTCCAATTGGAAACGCTGCACAAGTGCAACAACAGGTATTTGTTCCAGGTCTTCAACCTCATCCTATCCATCCTCAAGGAATCATGCATCAACATCAAGGCCAAAATATAGGTTACATTCCTCAAATTGGTCATCAATTTCCCCACCAGTTTGGCAACATGGGTATGAACATCAACCCGCAATATTCCCCACAGCAAGGAGGAAAATTTGCTGGGCCTCGTAAAACTACCCCTGTGAAAATAACTCACCCCGATACCCACGAAGAGCTTAGACTTGATAAAAGGGCAGATGATGGTGGGTCATCAGGTTCCAGGTCTCATTCTAGCATGCCTTCCCATTCTCCATCTGTCAAGCCATTTGCTGCTTCTCATGCTAACACTCAGCCACCAAGAATTAATTATGCTGTGAGCCATGGTCCACAATTATCATCGCATAATACCGTGCCTGGCAATAAAATTGTCACTTCTATTCCTGGCAATGTTGAACAACGTAATCAAGAATTTTCCCGTGATATGCCTAATGCAATTTCATCAACTCCTTTTGGAGTATCTTCTGTATCCATAAAGCCAAGTGGTGGGTCTGGTGTTGTGGACTCATCACCTGCCAATTCCAGTAATTCTGGTGATCAAAAGGGTGGATCTCCTAGTTCCTCAGTAACATCTAGTGATGTTTACTCTTTGGTGCCACCAAAAGGACCTGAAACTTGTTCTGAAATCTCTTCCCAACAATCTACTGCTGCATCTGTTTCTGCTGAGAAGCTTAAATCAGCTTCCTTGTTGCCTTCTTCAACTGCTTTTAGTGAGAATTCTGTTTCTGCTCTTAATGAAGGCAGAAACAAGGAATCTCTTGGTAGATCAAATTCTTTGAAGGATAATCAGAAGAAACTGCAGCAGAAAGACCAATTGCAACATCAGGTGGCTGTACAATCTTCTGCTGTGGGTAATGAACCTTTCCTAGCTGATGATGGTGGTATCTCTGCTTGTGTAGTTTCTGAAATTGTAGGAACTAAAACACCCTGTTCTGCAGCAACTGCCAATGAAGATCTATTAGCAATAGCTTCTGGCACATTTTCAGCTACCAGTGAGAGCATGCCTTCTTCTGTTGAAGAGAAGACCACTGGTTCTACAAAGGTGTCTGCTAGTGCTTCAGCTGAAGGACCTGTTACTCAAGCTGTGGATAGTTTGAACAATCATAAGAATGATGGGCTAGATGTATTATCCCGAGAGGATAAACAGCTGAGGCAGCACGAATTAGTCGGTGATAAAACTGAAATTTCAACTCTGCAGATAAGTAAAAATGTCAATGATGACAGTGGAGAATTTAGCCACCTCAAAAAAGGTGATTCAGAGCTAAGCACTGGGGTTGTAACTTTGAGGACTGGGCTGCAAGTACAGGTTGAAATTGAATCTGCAAGTTGCAGCATAGACCGTGACAAAATGGCTGATACTTTAGGCATGTCTACTTCTGCACTGAATTCTAAAGACACGTCTTTAAGCAGAAACGACAGTGTAGTGGGTAATGAAGTCACTTCTACAAATTCTGGCACATCAGATCATCAATCTTCTGGCAACCTCGaaacaaatttaaaacattGTAAGGATAGTTCGGAGGATTCTGGCACTGGCTCAGCGTCTCTTCCAGCAGCATCTGTTACTATGGACAGGCCAATTTTAGAGCCAAGTAAGGTGAAAGGTACATCAAAAGGGAAGAAGAAACTAAAGGAATTTCTTCAGAAAGCAGATGCTTCTGGGTCAACAGCTGATCTGTATAACGCGTATAAGGGACCTGAGGAAAAGAAAGAAGCTGTTGCAAGTTCAGAGACTTCTGGAAATTTGAAGCAGCTGCCTATGGATGCTGCTCAGCCAGATGCAGATGCAAATGAACAATGTGGGAAGAGTAAGGCTGAACTTGAGGACTGGGAGGATGCTGCCGATATGTCCACACCTAAGCTAGAAGTATCAGATAAAACTCATCAGGACAGCAACGGAAGTGAAGTTACTGAAAAAAAGTACTCTCGAgatttccttttaaaatttgcaGAGCGGTGCTCTGAGCTTCCCGAAGGGTTTGAAATCACGGCAGACATAGCTGAAGCTTTGATGGGTTCAAATATTGGTTCTCATGTTATGGTACGCGACGCACATCCTTCTCCTGGAAGAAATACAGATAGGTCAGGTGGGATGTCTCGGATAGATCGTCGTGGGAGTGGTgttattgatgatgataaatGGAGTAAAGTTTCTGGTGCTTTTCATTCTGATATGCGTTTGGATGGTATTGGAGGTAATACAGGATTCCGACCTGCACAAGGTGGCAATGCTGGTGTTTTAAGGAGTCCACGCCCACAAGGAAATGTACAATATGGTGGAGGGCTTCTTTCTGGGCCAATGCAATCGATGGTACATCAAGGAGGAATGCATAGACATAGCCCTGATGGCGAAAGGTGGCAGCGTGCTGCTAACTTCCAGCAGAGAGGTTTAATTCCATCTCCTTCTCAATCTCCTTTGCAGACGATGCACAAAGCTGAGAAGAAGTATGAGGTGGGTAAGGTGACAGATGAGGAACAGGCGAAGCAGAGGCAGTTGAAAGGTATATTGAACAAGTTAACTCCCCAGAATTTTGAGAAGCTTTTCGAGCAGGTTAAAGCAGTTAATATTGATAACGTAGTTACTCTCACTGGTGTCATCTCACAAATCTTTGAGAAGGCCTTGATGGAACCCACCTTCTGTGAAATGTATGCCAATTTCTGTTTTCATCTGGCAGCTGCGTTGCCTGATCTTAGTCAAGACAATGAAAAGATAACATTTAAGAGATTATTGTTAAATAAGTGCCAGGAAGAATTTGAGAGGGGTGAGAGAGAGCAAGAAGAAGCTAATAAAGCTGATGAGGGTGAGGTGAAACAGTCTGATGAGGAAAGAGAAGCGAAACGATCCAAGGCTAGAAGACGAATGTTGGGTAATATCCGGTTAATTGGAGAACTATATAAGAAGAAAATGTTGACAGAGAGAATAATGCACGAGTGCATAAAAAAGTTACTAGGTCAGTGTCAGAATCCGGATGAAGAAGATATTGAAGCTTTGTGCAAACTAATGAGTACTATCGGGGAGATGATTGACCACCCCAAAGCCAAGGAACATATGGATGCATATTTTGAAAGAATTAAATTATTGTCAAACAACATGAATTTATCTTCTAGGGTGAGGTTCATGTTAAAGGATACCATTGATTTGAGAAAGAATAGATGGCAACAAAGGAGAAAAGTTGAAGGTCCAAAGAAGATTGAAGAGGTGCACCGGGATGCTTCCCAAGAGAGGCAATCGCAAGCTGGTAGGCCTGGTCGTGGTATGGGTATTAGTACACCAAGAAGGACCCCTATGGATTTTGGTTCAAGAGGTTCATCTATGTTATCCCCTCCTAATGCTCAGATGGGTGGATTGCCTAATCAAATTCGTGGGTATGGTTCTCAGGATGTTCGTGGGTATGAAAGGCAATCTTTTGAGGCTAGGACGCTATCTATTCCCTTGCCTCAAAGATCTTTAGGTGATGAGTCAATAACCTTGGGGCCGCAAGGTGGTCTTGCTAGAGGAATGTCCAGTAGAGGTTCACCTGCCGTTTCCAGTTTTGCTGGTCCTAATGGTTACAGTAATTTATCAGAGCGCGCTTCATACAGCTCTAGGGAGGACCTCGCACCAAGATATGTTCCGAATAGATTTGCTGGTCCAACtgtttatgatcaatcaagtgCTCCGGAGCAAAGTGTGCATTACGGTATCAGGGATTTGGGAAGTGCAGATAGGTTTCTTGACAGGCCTGTTGTAAATTCACCTCCTGCCCGAGCACAAGAGACTGCACTCTCCCAGAATACCTCTTCAGAAAAGGGTTTGTCCGATGAGAAACTACAGAACATGTCCATGGCAGCAATTAAAGAATACTATAGTGCTAGAGATGTGAACGAAGTTGTTTTGTGCGTCAAGGATCTGAACTCTCCAAGCTTTCATCCTTCCATGGTTTATCTTTGGGTCTCAGATTCATTTGAGAGAAAGGATACAGAGAGAGATCTTTTGGCCAAACTGCTGATCGACCTTGTGAAATCTCATGGCGGTATCTTAAGTCAAGCCCAGCTCATTAAAGGGTTTGAATCTGTTCTAAGTACTTTGGAAGATGTGGTTACGGATGCCCCAAGAGCACCGGAGTATCTTGGTCGCATTTTTGCCAAAGCTATAACAGAACATGTAGCCTCTTTGGAAGAGATTGGGCTGTTAATACGTGACGGCGGAGAGGAATCAACTAGCCGCTTTGAAATTGGACTTTCAGCTGACATTCTTGGAAGTACCTTGGAAGTGATACAAACAGAGAAGGGTGATGCATTCTTGAATGAGATCCAGACAAGCTCCAACTTGCAATTGCAGACCTTCCGTCCGCCAGAACCTATTAAATCCCGGAAGCTAGAAAAATTCCTTTAG 5373 0.4389 MSFNQSKSDKSDTAYRRTGRSTSFNQQRGNTGGGSYVKAGTGAAAPSPSLSSSRSFNKKSNNHAQGGPSRVNPTQANSAESNYASAVRATPNGSHVQPHFHGGSDASVTNATAKPSESSAAQRITRAVPKAPISQPPPVSSDSAAPRTPAKGDASKAFPFQFGSISPGIVNVMTIPARTSSAPPNIDEQNRDQARHDSLRPVPSVPTPTVPKQLPAKKDTGVADQSKVGETHTGTRAKKDTHVSPLPPASLMQNHSVVPLTGMSMPMQYHHQSQAPMHFSAANPQIQSHGMSTAPHQMPLQMPFPIGNAAQVQQQVFVPGLQPHPIHPQGIMHQHQGQNIGYIPQIGHQFPHQFGNMGMNINPQYSPQQGGKFAGPRKTTPVKITHPDTHEELRLDKRADDGGSSGSRSHSSMPSHSPSVKPFAASHANTQPPRINYAVSHGPQLSSHNTVPGNKIVTSIPGNVEQRNQEFSRDMPNAISSTPFGVSSVSIKPSGGSGVVDSSPANSSNSGDQKGGSPSSSVTSSDVYSLVPPKGPETCSEISSQQSTAASVSAEKLKSASLLPSSTAFSENSVSALNEGRNKESLGRSNSLKDNQKKLQQKDQLQHQVAVQSSAVGNEPFLADDGGISACVVSEIVGTKTPCSAATANEDLLAIASGTFSATSESMPSSVEEKTTGSTKVSASASAEGPVTQAVDSLNNHKNDGLDVLSREDKQLRQHELVGDKTEISTLQISKNVNDDSGEFSHLKKGDSELSTGVVTLRTGLQVQVEIESASCSIDRDKMADTLGMSTSALNSKDTSLSRNDSVVGNEVTSTNSGTSDHQSSGNLETNLKHCKDSSEDSGTGSASLPAASVTMDRPILEPSKVKGTSKGKKKLKEFLQKADASGSTADLYNAYKGPEEKKEAVASSETSGNLKQLPMDAAQPDADANEQCGKSKAELEDWEDAADMSTPKLEVSDKTHQDSNGSEVTEKKYSRDFLLKFAERCSELPEGFEITADIAEALMGSNIGSHVMVRDAHPSPGRNTDRSGGMSRIDRRGSGVIDDDKWSKVSGAFHSDMRLDGIGGNTGFRPAQGGNAGVLRSPRPQGNVQYGGGLLSGPMQSMVHQGGMHRHSPDGERWQRAANFQQRGLIPSPSQSPLQTMHKAEKKYEVGKVTDEEQAKQRQLKGILNKLTPQNFEKLFEQVKAVNIDNVVTLTGVISQIFEKALMEPTFCEMYANFCFHLAAALPDLSQDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKQSDEEREAKRSKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQCQNPDEEDIEALCKLMSTIGEMIDHPKAKEHMDAYFERIKLLSNNMNLSSRVRFMLKDTIDLRKNRWQQRRKVEGPKKIEEVHRDASQERQSQAGRPGRGMGISTPRRTPMDFGSRGSSMLSPPNAQMGGLPNQIRGYGSQDVRGYERQSFEARTLSIPLPQRSLGDESITLGPQGGLARGMSSRGSPAVSSFAGPNGYSNLSERASYSSREDLAPRYVPNRFAGPTVYDQSSAPEQSVHYGIRDLGSADRFLDRPVVNSPPARAQETALSQNTSSEKGLSDEKLQNMSMAAIKEYYSARDVNEVVLCVKDLNSPSFHPSMVYLWVSDSFERKDTERDLLAKLLIDLVKSHGGILSQAQLIKGFESVLSTLEDVVTDAPRAPEYLGRIFAKAITEHVASLEEIGLLIRDGGEESTSRFEIGLSADILGSTLEVIQTEKGDAFLNEIQTSSNLQLQTFRPPEPIKSRKLEKFL 1790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00839 1790 MobiDBLite consensus disorder prediction 484 528 - -
Tsu04g00839 1790 MobiDBLite consensus disorder prediction 1582 1599 - -
Tsu04g00839 1790 MobiDBLite consensus disorder prediction 103 123 - -
Tsu04g00839 1790 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 131 1780 - -
Tsu04g00839 1790 MobiDBLite consensus disorder prediction 944 969 - -
Tsu04g00839 1790 Gene3D - 1594 1790 - -
Tsu04g00839 1790 MobiDBLite consensus disorder prediction 362 459 - -
Tsu04g00839 1790 MobiDBLite consensus disorder prediction 1577 1599 - -
Tsu04g00839 1790 MobiDBLite consensus disorder prediction 1 161 - -
Tsu04g00839 1790 MobiDBLite consensus disorder prediction 1254 1283 - -
Tsu04g00839 1790 MobiDBLite consensus disorder prediction 17 34 - -
Tsu04g00839 1790 MobiDBLite consensus disorder prediction 867 881 - -
Tsu04g00839 1790 SUPERFAMILY ARM repeat 1156 1386 IPR016024 -
Tsu04g00839 1790 MobiDBLite consensus disorder prediction 899 918 - -
Tsu04g00839 1790 SMART ma3_7 1603 1717 IPR003891 -
Tsu04g00839 1790 MobiDBLite consensus disorder prediction 792 832 - -
Tsu04g00839 1790 ProSiteProfiles MI domain profile. 1602 1726 IPR003891 -
Tsu04g00839 1790 MobiDBLite consensus disorder prediction 383 404 - -
Tsu04g00839 1790 Pfam MA3 domain 1609 1713 IPR003891 -
Tsu04g00839 1790 MobiDBLite consensus disorder prediction 405 459 - -
Tsu04g00839 1790 MobiDBLite consensus disorder prediction 1429 1447 - -
Tsu04g00839 1790 MobiDBLite consensus disorder prediction 1387 1457 - -
Tsu04g00839 1790 MobiDBLite consensus disorder prediction 569 606 - -
Tsu04g00839 1790 MobiDBLite consensus disorder prediction 180 252 - -
Tsu04g00839 1790 MobiDBLite consensus disorder prediction 792 884 - -
Tsu04g00839 1790 MobiDBLite consensus disorder prediction 1387 1408 - -
Tsu04g00839 1790 MobiDBLite consensus disorder prediction 664 688 - -
Tsu04g00839 1790 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 131 1780 IPR045208 GO:0003743
Tsu04g00839 1790 Coils Coil 1244 1264 - -
Tsu04g00839 1790 MobiDBLite consensus disorder prediction 484 546 - -
Tsu04g00839 1790 MobiDBLite consensus disorder prediction 586 601 - -
Tsu04g00839 1790 MobiDBLite consensus disorder prediction 45 92 - -
Tsu04g00839 1790 SMART if4_15 1162 1384 IPR003890 GO:0003723|GO:0005515
Tsu04g00839 1790 SUPERFAMILY ARM repeat 1596 1785 IPR016024 -
Tsu04g00839 1790 MobiDBLite consensus disorder prediction 569 585 - -
Tsu04g00839 1790 Pfam MIF4G domain 1162 1383 IPR003890 GO:0003723|GO:0005515
Tsu04g00839 1790 Gene3D - 1162 1397 - -
Tsu04g00839 1790 MobiDBLite consensus disorder prediction 1013 1042 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00839 Tsu-Chr4 8034088 8043014 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00839 1 707 Eukaryotic Initiation Factors Gene Family AT3G60240 32.902 1.52e-67 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00839 K03260 - gmx:100796636 2334.3