Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00835 ATGCTAGAGGGAGCATCCCCACTTGGACAAGGGGGTTCAAATCTTAGACCACCACACATTCCACCGACGTTGGAATTTTCGATTGAAAGAGTGCTGCACCATAACAAGATTATGGCGAAAAGCAGTAAAGGATGTGCCATTGGAATAGACCTTGGGACAACTTACTCATGTGTTGGTGTGTGGGAAGAAAAACATAGCACAGTTGCTATTATTTACAATGATCAAGGCAAACAAACTACTCCATCTTTTGTTGCTTTCACTGAAGATGAAAGGTTGATCGGTGATGCTGCGAAGAATCAGGCTGCCACAAACCCACAAAACACTGTCTTTGATGCTAAGAGGCTAATTGGTAGGAAGTTTAGTGATCTCAAGGtccaaaaagataaaatattgtgGCCATTCAATGTCATTGCTGGTATGAAGGACAAACCAATGATTTCCGTCAAATATAAGGGACAAGAGAAGAACTTATGTGCTGAGGAAATCTCATCTATGGTGCTCACAAAGATGCGGGAGATTGCAGAAGCATATTTGGAATCGCCAGTCAAGAATGCAGTCATTACTGTGCCTGCTTATTTCAATGATTCTCAGCGTAAAGCCACCATAGATGCTGGTGTCATTGCTGGTCTTAATGTTTTGAAGATCATCAATGAACCTACTGCTGCAGCTATTGCATATGGCCTTGACAAGAGAACTAACTGCGTCGGAGAACgaaatatttttgtctttgaCCTTGGTGGTGGGACTTTTGATGTGTCTCTCCTTACAATTAAGGATAAGGTCTTTGAAGTTAAGGCCACCGGTGGAAACACTCACCTTGGAGGAGAGGATTTTGATAATAGACTGGTTAACTACTTTGTTAAGGAGTtcaaaaagaaggaaaatttGAACATAATTGGGAACCCAAAAGCCTTGAGGAGGTTGAGAACTGCATGTGAGGAGGCGAAAAGGGCGCTCTCATTTGCTGTTATGACCAATGTTGTGGTAGATGCTTTATTTCAGGGTGTTGATTTTTCTTCATCAATCACTCGTGCCAAGTTTGAGGAAATCAATATGGACCTTTTTGACAAATGCATGTCGATTGTTGAGAGGTGTCTTACTGATGCTAAGATGGACAAGAGTAGTGTTGATGATGTTGTCCTTGTTGGGGGTTCTTCAAGGATTCCTAAAGTGCAGCAACTATTACAGAATTTCTTCAAGAGGAAGGAACTATGCCAGAGCATCAACCCAGACGAGGCTGTTGCTTATGGTGCAGCGGTACAGGCTGCTTTGTTGAGTAGAGGCATTAAGAATGTTCCAAAGTTGGTGTTGATCGATGTCGCACCTCTGTCACTAGGTTGGTGTATACTACATGGTGTTATGAGTGTTGTGATTCCTAGGAACACATCCATTCCCGTgaagaagacaaaaaaatatactacaGTTGAAGATAACCAATCAGTGGTCCCAATTAAGGTGTATGAGGGCGAGAGAACAAGAGCCAGTGATAATCATTTTCTTGGTTCATTCGTTCTTTCAGGTTTACCCCCTGCTGCTCGTGGCCATCTTTATGACGTATGTTTTGATGTCGATCAAAATGGTATTTTAACAGTTTCTGCTATCGATAAATCCACTGGCAGTAAGAATGAGCTTACAATAACCAATGACAAAGGAAGGTTGTCGACTGAAGAAATTAAAAGATTGATTCAAGAAGCTGAGGCTTACTCTGTTTCAGATAGGAACTTCTTAAGAAAGGCAGAAGTAATGAATGAACTGGACGAATGTGTTTACAAAATGAGAAATCTGTTGAAGAAGAAGGATGCTAGTTTAAAGCTCTCTTCAgaagaaaacaagaagatcaGAAGCCGCAAATTTACTTAA 1860 0.3962 MLEGASPLGQGGSNLRPPHIPPTLEFSIERVLHHNKIMAKSSKGCAIGIDLGTTYSCVGVWEEKHSTVAIIYNDQGKQTTPSFVAFTEDERLIGDAAKNQAATNPQNTVFDAKRLIGRKFSDLKVQKDKILWPFNVIAGMKDKPMISVKYKGQEKNLCAEEISSMVLTKMREIAEAYLESPVKNAVITVPAYFNDSQRKATIDAGVIAGLNVLKIINEPTAAAIAYGLDKRTNCVGERNIFVFDLGGGTFDVSLLTIKDKVFEVKATGGNTHLGGEDFDNRLVNYFVKEFKKKENLNIIGNPKALRRLRTACEEAKRALSFAVMTNVVVDALFQGVDFSSSITRAKFEEINMDLFDKCMSIVERCLTDAKMDKSSVDDVVLVGGSSRIPKVQQLLQNFFKRKELCQSINPDEAVAYGAAVQAALLSRGIKNVPKLVLIDVAPLSLGWCILHGVMSVVIPRNTSIPVKKTKKYTTVEDNQSVVPIKVYEGERTRASDNHFLGSFVLSGLPPAARGHLYDVCFDVDQNGILTVSAIDKSTGSKNELTITNDKGRLSTEEIKRLIQEAEAYSVSDRNFLRKAEVMNELDECVYKMRNLLKKKDASLKLSSEENKKIRSRKFT 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00835 619 SUPERFAMILY Actin-like ATPase domain 237 425 IPR043129 -
Tsu04g00835 619 MobiDBLite consensus disorder prediction 1 20 - -
Tsu04g00835 619 Gene3D Actin; Chain A, domain 4 274 357 - -
Tsu04g00835 619 PANTHER HEAT SHOCK 70 KDA PROTEIN 41 615 - -
Tsu04g00835 619 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 426 607 IPR029047 -
Tsu04g00835 619 Gene3D - 231 405 - -
Tsu04g00835 619 PANTHER HEAT SHOCK PROTEIN 70KDA 41 615 IPR013126 GO:0005524|GO:0140662
Tsu04g00835 619 Pfam Hsp70 protein 46 615 IPR013126 GO:0005524|GO:0140662
Tsu04g00835 619 Gene3D - 47 423 - -
Tsu04g00835 619 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 431 586 IPR029047 -
Tsu04g00835 619 ProSitePatterns Heat shock hsp70 proteins family signature 3. 379 393 IPR018181 -
Tsu04g00835 619 Gene3D - 110 165 - -
Tsu04g00835 619 ProSitePatterns Heat shock hsp70 proteins family signature 1. 49 56 IPR018181 -
Tsu04g00835 619 SUPERFAMILY Actin-like ATPase domain 45 230 IPR043129 -
Tsu04g00835 619 ProSitePatterns Heat shock hsp70 proteins family signature 2. 242 255 IPR018181 -
Tsu04g00835 619 PRINTS 70kDa heat shock protein signature 45 58 - -
Tsu04g00835 619 PRINTS 70kDa heat shock protein signature 75 87 - -
Tsu04g00835 619 PRINTS 70kDa heat shock protein signature 434 453 - -
Tsu04g00835 619 PRINTS 70kDa heat shock protein signature 376 392 - -
Tsu04g00835 619 PRINTS 70kDa heat shock protein signature 248 258 - -
Tsu04g00835 619 PRINTS 70kDa heat shock protein signature 97 105 - -
Tsu04g00835 619 PRINTS 70kDa heat shock protein signature 185 205 - -
Tsu04g00835 619 PRINTS 70kDa heat shock protein signature 514 530 - -
Tsu04g00835 619 PRINTS 70kDa heat shock protein signature 408 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00835 Tsu-Chr4 7999074 8004484 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00835 38 613 Calmodulin-binding Proteins AT3G12580 66.782 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00835 K03283 - gmx:102667578 845.499