Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00821 ATGCGAGCATTCAATGACGCTACATTTGAAGTGTTGAGAAATAATACTGGCTTGTGCGGTAATGTTTCTAGCTTGAAGCCTTGCATAAAACCAACCAGTGGGTCACATAATAATATGACTAAAAAAGTGATATTCTTCATAGTTTTACCTCTAGCACTAGGAACTCTTATGCTAGCATTCATTTGTTTCAAATTCTCGTGTTGTTTTTGTCATTCGGCGGCCACTAGAGACAACCAGGACGGAGGAAACAACATTGCTCCTAAAAATGTATTTACAATATGGAGCTTTGATGGGAAAATGGTGTATGAGAACATAATTGAAGCCACAGAAGAGTTTGATGACAAATATCTCATTGGAGTAGGAGCGCATGGAAGTGTTTACAAAGCAGAGTTGCAGACAGGTCAAGTAGTTGCTGTTAAAAAACTCCATTCAGTAGCAGATGCAGAAAACCCCGATCTAAAATCATTCACAAATGAGATTCAAGCTCTAACAGAAATTCGGCATCGCAACATTGTGAAGCTATATGGATTTTGTTCACATTCGCACTTATCGTTTTTGGTTTATGAGTTCATGGAGAAAGGtagtttggaaaatattttgaaagaagATGAGGAAGCAATTGCATTTGGTTGGAATAAGAGGGTGAATGCCATTAAAGATGTAGCTAATGCTTTATGCTATATGCACCATGATTGCTCCCCTCCGATTGTTCATCGAGATATATCGATCAAGAATATTCTACTGGATTTAGAATATGTGGCTCGTGTCTCCGACTTTGGAACAGCTAAGCTTCTTAATCCTAACTCATCCAATTGGACCTCTTTTGCAGGCACCTTTGGATATGCTGCTCCAGAACTTGCATACACAATGGAagtgaatgagaaaaatgatgTGTATAGTTTTGGAGTATTAGCATTGGAAATACTTTTTGGAAAACACCCTGGAGATGATATTGTGTCTAATTCTTTACAATGGATTATTATGGGCTCAACACTTGATAGTATGCCATTGATGAGTAAGTTGGATCAACGTCTCTCTCGTCCGGTGAATCGTCGACAAGCCAAGGAGTTAGTATCTATTGCAAAGACAACAATTTCTTGTTTATCTGATAGTCCACAATCTCGCCCTACCATGGAGCAGGTTTCTAAGGAGCTTTTAAGTGTGTAG 1167 0.3762 MRAFNDATFEVLRNNTGLCGNVSSLKPCIKPTSGSHNNMTKKVIFFIVLPLALGTLMLAFICFKFSCCFCHSAATRDNQDGGNNIAPKNVFTIWSFDGKMVYENIIEATEEFDDKYLIGVGAHGSVYKAELQTGQVVAVKKLHSVADAENPDLKSFTNEIQALTEIRHRNIVKLYGFCSHSHLSFLVYEFMEKGSLENILKEDEEAIAFGWNKRVNAIKDVANALCYMHHDCSPPIVHRDISIKNILLDLEYVARVSDFGTAKLLNPNSSNWTSFAGTFGYAAPELAYTMEVNEKNDVYSFGVLALEILFGKHPGDDIVSNSLQWIIMGSTLDSMPLMSKLDQRLSRPVNRRQAKELVSIAKTTISCLSDSPQSRPTMEQVSKELLSV 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00821 388 ProSiteProfiles Protein kinase domain profile. 112 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g00821 388 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
Tsu04g00821 388 Gene3D Transferase(Phosphotransferase) domain 1 191 388 - -
Tsu04g00821 388 SUPERFAMILY Protein kinase-like (PK-like) 92 385 IPR011009 -
Tsu04g00821 388 Pfam Protein kinase domain 114 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g00821 388 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 386 - -
Tsu04g00821 388 MobiDBLite consensus disorder prediction 369 388 - -
Tsu04g00821 388 Gene3D Phosphorylase Kinase; domain 1 76 190 - -
Tsu04g00821 388 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 386 - -
Tsu04g00821 388 ProSitePatterns Tyrosine protein kinases specific active-site signature. 236 248 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00821 Tsu-Chr4 7850570 7851864 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00821 3 284 Receptor kinase-like Gene Family AT4G08850 49.658 1.46e-85 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tsu04g00821 Pkinase 4.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00821 - - mtr:MTR_7g045710 525.783