Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00805 ATGGAATTGGATGGCAATAATTTTTATGGCCACCTTTCATCCAACTGGGGAAAGTTTCATAATTTGACACAACTTCACATCTCCAAAACTAATATATCAGGTTGTATACCACCCGAACTCAGTGAAGCACCTAACTTATATTCAATTGACCTATCTTCAAACCATCTTACAGGAAATATTCCAAAGGAGTTAAGAAACTTGACTTTGTTGTCAATTCTACAGATAAGCAACAACCATCTTTCAGGAAACGTTCCTGTGCAAATAGCATCCTTATATGAACTTGACACTTTAGACCTTGCAGGAAATAATCTAAGTGGCTTCATCACAAAACAACTTGCAAATTTACCCAAGTTATGGAACTTAAATTTGAGCCATAACAAATTCATAGGAAATATTCCTGTTGAATTTGGACaacttaaagtccttcgaagtCTTGATCTTAGTGGAAATCTTTTGGATGGAACAATACCACCAATGCTTACAGAGTTGAAATACTTGGAAACATTAAATCTTGCACATAATAGCCTTTCTGGCCTTATTCCTTCCGGCTTTGATCAGATGTTGAGTTTGACGTTTGTTGATATATCATATAACCAATTGGAGGGTCCACTCCCCAACATCCGAGCATTCAACAACGCTACAATTGAAGTGTTGAGAAATAACAAAGGCTTGTGTGGTAATGTTTATGGCTTAGAGTCCTGTCCAACATCAAGAAGTGGATCTCATCATCATTCTCATCATATTAGCAAAGTCTTGTTAATAGTTTTACCCCTAATAACTGTTGGAACCGTAATGCTAGCTTTAATTTACTATAAATTCTCATATCATCTCTTCCAAACATCAACCACCAATGAAAACCAGGTTGGAGGGAACATCAGTGTACTTCAAGATGTATTTACTATATGGAACTTTGATGGGAAAGTTGTGTATGAGAACATTGTGGACGCCACAGAAGAGTTTGATGACAAACATCTCATTGGAGTTGGAGGGCACGGAAGTGTATACAAAGCTAAGTTGCAAACAGGTCAAGTAGTTGCTGTGAAAAAGCTCCATTCAGTAGCAAATGGGGGAAATTCCAATCTAAAATCATTCACAAATGAGATACAAACTCTGACCGAAATTCGACATCGCAATGTTGTGAAACTGTATGGATTTTGCTCACATTCACAATTGTCATTTTTGGTTTATGAGTTCATAGAGAAAGGTAGTTTGGAAAAGATTTTGATAGATGATGAACAAGCAATTGCATTTGATTGGAATAAGAGGATCAATGTCATTAAAGATGTAGCCAATGCTTTATGCTATATGCATCATGATTGCTCACTTCCAATTGTTCATCGAGATATATCAAGCAAGAACATTCTTCTTGATATGGAATGTGTGGCTCGTGTCTCTGACTTTGGAACAGCTAAGCTTCTAAATCTTAATTTAACCAACTCGACGTCATTTGCATGCACATTTGGATATGCTGCTCCAGAACTTGCATACACGACGAGAGTTAATGAGAAATGTGATGTATATAGTTTTGGAGTATTAGCATTGGAAATACTTTTTGGAGAACATCCTGGAGATGTTGTATCTTTATGGACCATCGTTGATGCGATGCTACTAATGGATAAGTTGGACCAACGTCTTCCTCATCCTTTGAATCCCATTATCGAGGAGTTAGTAGCAATTGCAGTGATAGCTTTAGCATGTTTAACTGAAAGTCCTCAATCTCGCCCTACCATGAAGCAGGTTTCAAAGGATTTAGCAGGTTTTCAAGGAGATTGTAATCTCGCAGTGGTTTTACACCAATAG 1800 0.3683 MELDGNNFYGHLSSNWGKFHNLTQLHISKTNISGCIPPELSEAPNLYSIDLSSNHLTGNIPKELRNLTLLSILQISNNHLSGNVPVQIASLYELDTLDLAGNNLSGFITKQLANLPKLWNLNLSHNKFIGNIPVEFGQLKVLRSLDLSGNLLDGTIPPMLTELKYLETLNLAHNSLSGLIPSGFDQMLSLTFVDISYNQLEGPLPNIRAFNNATIEVLRNNKGLCGNVYGLESCPTSRSGSHHHSHHISKVLLIVLPLITVGTVMLALIYYKFSYHLFQTSTTNENQVGGNISVLQDVFTIWNFDGKVVYENIVDATEEFDDKHLIGVGGHGSVYKAKLQTGQVVAVKKLHSVANGGNSNLKSFTNEIQTLTEIRHRNVVKLYGFCSHSQLSFLVYEFIEKGSLEKILIDDEQAIAFDWNKRINVIKDVANALCYMHHDCSLPIVHRDISSKNILLDMECVARVSDFGTAKLLNLNLTNSTSFACTFGYAAPELAYTTRVNEKCDVYSFGVLALEILFGEHPGDVVSLWTIVDAMLLMDKLDQRLPHPLNPIIEELVAIAVIALACLTESPQSRPTMKQVSKDLAGFQGDCNLAVVLHQ 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00805 599 Pfam Protein kinase domain 321 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g00805 599 ProSitePatterns Tyrosine protein kinases specific active-site signature. 444 456 IPR008266 GO:0004672|GO:0006468
Tsu04g00805 599 ProSiteProfiles Protein kinase domain profile. 320 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g00805 599 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 586 - -
Tsu04g00805 599 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 586 - -
Tsu04g00805 599 Gene3D Ribonuclease Inhibitor 1 243 IPR032675 -
Tsu04g00805 599 SUPERFAMILY L domain-like 3 226 - -
Tsu04g00805 599 Gene3D Phosphorylase Kinase; domain 1 283 398 - -
Tsu04g00805 599 Pfam Leucine rich repeat 70 128 IPR001611 GO:0005515
Tsu04g00805 599 Pfam Leucine rich repeat 142 200 IPR001611 GO:0005515
Tsu04g00805 599 SUPERFAMILY Protein kinase-like (PK-like) 306 584 IPR011009 -
Tsu04g00805 599 Gene3D Transferase(Phosphotransferase) domain 1 399 594 - -
Tsu04g00805 599 ProSitePatterns Protein kinases ATP-binding region signature. 326 349 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00805 Tsu-Chr4 7725226 7727160 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00805 1 492 Receptor kinase-like Gene Family AT4G08850 46.000 1.58e-136 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tsu04g00805 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00805 - - mtr:MTR_7g039330 918.302