Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00762 ATGGCGAAATTTCACGGATTTAAGCTCGGGAGGCACCTTGTACGGTTTTCTAGATGTGTCTTTAAAAACAAACGGATCCAACCTGAATATCTTCGATTTAGTTGTCTTTCTCGTTCTCCGACGATGAAGATTCTCAAGTGGGGTCGTAAGCTTAGGGAAGGTGCCATGTCACTTCTTAATAGGCCAAGTTATGTCCGGTTAGGATCCACCCCAAAATTCAGCGTGCCGAAGGGACACATGGTCGTGTATGTGGGACGGAAAGAGGAAGAGATAAATAGGGTTATGGTGCCGGTGATATACTTTAACCATCCGTTGTTTGGTAAATTGCTTAGAGAGGTTGAGGAGGAGTATGGGTTCAACCACCAAGGGGGAATCACGATACCATGCCAGTTCACGGAGTTTGAACGGGTCAAGACATGGATTGCATCAGGATCCGACAATTGCACCGGTCGAAAATTGTATTCGAAGACGTGA 474 0.4599 MAKFHGFKLGRHLVRFSRCVFKNKRIQPEYLRFSCLSRSPTMKILKWGRKLREGAMSLLNRPSYVRLGSTPKFSVPKGHMVVYVGRKEEEINRVMVPVIYFNHPLFGKLLREVEEEYGFNHQGGITIPCQFTEFERVKTWIASGSDNCTGRKLYSKT 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00762 157 Pfam Auxin responsive protein 69 138 IPR003676 GO:0009733
Tsu04g00762 157 PANTHER SMALL AUXIN-UP RNA-RELATED 1 152 - -
Tsu04g00762 157 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 152 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00762 Tsu-Chr4 7188350 7189384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00762 71 134 Calmodulin-binding Proteins AT3G43120 46.875 2.05e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00762 K14488 - mtr:MTR_0388s0020 235.343