Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00760 ATGGCATACATAGAATCCTCATGCCAAGGAACACGGTACCCAGATCTATGCATGCGGTCCTTAGCATCGTTCGCCAAATACTCCACCATAGATGGACCTGACCACTTAGCCCACATAGCCCTATCTGTAAGCCTCGTCAAAGCACTTCAAACAAGAGGTTACTTATTAAAAGTAgttaaagaaattgaagaaatcaacAAGGGTAGCGAGCCCGGTCTTGCATACTTAACTATGCAAGATTGCGAGAAACAAATCAGTGATAGCGTTGATCAACTTAGCCAAGCAATTAAAGAGCTTCGTCGGGTGAATAAAGGTACAATTATTGATGATAAAATGTTGTGGCATATAAGTAACGTCGAGACATGGGTGAGCACTGCTTTAACCGATGCTAGCTATTGTGTGCAATCGTTTCCCGGTCATAGGATGAGTAAGAGGACTGCTACTATAAAGAGTAAGGCACAAAATGTTGCTGAGGTTACTAGTAATGGTCTTGCTTTGTTTCATAGGTATGCTGCTAGGTACAAAGCAGCAGCAGCTGCTAGAGCTGCCAAGAAACCATAA 561 0.4153 MAYIESSCQGTRYPDLCMRSLASFAKYSTIDGPDHLAHIALSVSLVKALQTRGYLLKVVKEIEEINKGSEPGLAYLTMQDCEKQISDSVDQLSQAIKELRRVNKGTIIDDKMLWHISNVETWVSTALTDASYCVQSFPGHRMSKRTATIKSKAQNVAEVTSNGLALFHRYAARYKAAAAARAAKKP 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00760 186 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 170 IPR035513 -
Tsu04g00760 186 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 3 169 IPR035513 -
Tsu04g00760 186 PANTHER PECTINESTERASE INHIBITOR-LIKE 2 174 - -
Tsu04g00760 186 Coils Coil 78 98 - -
Tsu04g00760 186 Pfam Plant invertase/pectin methylesterase inhibitor 3 166 IPR006501 GO:0004857
Tsu04g00760 186 PANTHER BNAANNG18590D PROTEIN 2 174 - -
Tsu04g00760 186 SMART PMEI_2 1 166 IPR006501 GO:0004857
Tsu04g00760 186 TIGRFAM PME_inhib: pectinesterase inhibitor domain 3 169 IPR006501 GO:0004857
Tsu04g00760 186 CDD PMEI-like_3 6 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00760 Tsu-Chr4 7179212 7179772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00760 4 167 Carbohydrate Esterase AT3G49220 26.946 1.70e-09 54.3