Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00753 ATGTCTTATCTCTTATTCCTACTTCTAATTCTAAAGCTACAAATATTTCTCATATTTTCTTCTCAATCTCTTTCCTTAAACACTGAACTTGACACTTTAATTGCTATTAAACACTCTTTAGACCCAGAAAACCATGTCTTAATCTCATGGAACATTCATTCTGATCCATGTAGTGGAACTTTTGAAGGTGTTGCTTGTAATGAACAAGGTCTTGTGACTAATATTTCACTTCAAGGAAAAGGTTTATCAGGGAAATTACCATCAGTGATTGGTAATCTTAAGAGTTTAACTGGTCTTTACCTTCATTTCAATGCTTTAAATGGGAATTTACCTAAGGAAATTGCAGGATTAACTCAGCTTAGTGATTTGTATCTTAATGTTAATAATTTCTCTGGTTTTATTCCTCATGAGATTGGTAACATGTCAAATCTTCAAGTTTTGCAGCTTTGTTATAATGAGCTTAATGGAAGTATACCTACTGAGCTAGGCAAATTAAAGCGGCTAAGCGTTCTTGCGCTCCAATATAATCACTTAAGTGGCGCAATTCCTGCAAGTTTGGGTGAGCTAGAGACACTAGAAAGATTGGATCTCAGCTTCAATACCCTTTTTGGTCCAGTTCCAGTGACATTAACTTATCCACCTAAACTACAGACTCTGGATATTCGAAACAATTCACTATCCGGCAGTGTCCCTTCAGCTCTGCAAAGACTGAAAGGAGGGTTACAGTATTCTAACAATCATGGTTTATGTGGAACTGGATTTGCCGATTTAGATTCTTGTCAAATAGTAAGCAATTCAGATCCAATTAGACCAGAACCATATGAACCAAGTAAAAATTCAACAATTGGTTTTCCAGTATCACCTGAAGTAATGGATAAAAAATGTGGTAATGCCGGTTGTAGAAAGCGGTCAGAATCTTCGACAGTTGGTTTGGTTTTTGTGGTGATTGGCGTTGTTATTGTTTCTTCTATTACTGGCTTTTTTCTTATCTTGCGGTACCGTcgtgaaaaacagaaaattggaACCACTGCTGAAATTTCTAATATCCGGCTTAGTACTGACAAGATCAAGGAAGTCTACAGGAAAAACGTGTCGCCGCTTATAAGTTTGGAGTATTCCAGTGGATGGGATCCATTATCCAAAGATCTCGGTGGTTATACGCAGGAATTTCTCGAGAGTTTTATGTTTAATCTCGAAGAAGTAGATCGCGCAACTCAATGTTTCTCAGAgatgaatttattggtgaagAATAATATATCCGCTAACTATAGAGGAATCTTGAGAGATGGATCTGTTGTGGTTATAAAGTGCATTGCCAAGACAAGCTGCAAGTCTGATGAAACCGAATTCTTGAAAGGTTTGAAATTATTAACTTCATTAAAGCACGGAAATCTTGTTCGGTTGAGAGGCTTTTGCTGTTCGAAAGGCCGCGGAGAATGTTTTCTGGTTTATGATTTTGTGTCAAATGGAAGTTTGTCAAAGTATCTTGATGTTAAAAGAGGAAGTGCTGAGGTACTTGAATGGTCCACAAGAGTGTCCATAATCCATGGTATTGCCAAAGGTATTGGTTATCTGCATGGAAACAAAGGAAGCAAACATTCTCTAGTTCATCAGAATATATCAGCTGAAAAAGTACTTCTCGATTATCGATACAATTCCTTACTTGCAGATTCAGGTTTGCACAAACTCCTTGCAGATGATGTTGTTTTCTCCACCCTCAAAGCTAGTGCTGCTATGGGGTACCTAGCGCCTGAATACACAACAACCGGTCGTTTCACTGAAAAGAGTGACGTGTACGCTTTTGGTGTGATAGTTTTCCAGCTTCTCACTGGAAAACATGATATCACTCAATTAAATCGACAATCATTAGAAAGTGGTGGTTTGAAAGATATCATTGATGAGAATCTTGAAGGGAAGTTCTTAGAATCAGAGGCAGAGAAATTGGCGGGACTCGCTTTGGTTTGCACCGATGAATCTCCTCATCGTCGACCAACTATGGAGAATGTAATGGTAGAATTGAGTGATAAATGGTAA 2034 0.3732 MSYLLFLLLILKLQIFLIFSSQSLSLNTELDTLIAIKHSLDPENHVLISWNIHSDPCSGTFEGVACNEQGLVTNISLQGKGLSGKLPSVIGNLKSLTGLYLHFNALNGNLPKEIAGLTQLSDLYLNVNNFSGFIPHEIGNMSNLQVLQLCYNELNGSIPTELGKLKRLSVLALQYNHLSGAIPASLGELETLERLDLSFNTLFGPVPVTLTYPPKLQTLDIRNNSLSGSVPSALQRLKGGLQYSNNHGLCGTGFADLDSCQIVSNSDPIRPEPYEPSKNSTIGFPVSPEVMDKKCGNAGCRKRSESSTVGLVFVVIGVVIVSSITGFFLILRYRREKQKIGTTAEISNIRLSTDKIKEVYRKNVSPLISLEYSSGWDPLSKDLGGYTQEFLESFMFNLEEVDRATQCFSEMNLLVKNNISANYRGILRDGSVVVIKCIAKTSCKSDETEFLKGLKLLTSLKHGNLVRLRGFCCSKGRGECFLVYDFVSNGSLSKYLDVKRGSAEVLEWSTRVSIIHGIAKGIGYLHGNKGSKHSLVHQNISAEKVLLDYRYNSLLADSGLHKLLADDVVFSTLKASAAMGYLAPEYTTTGRFTEKSDVYAFGVIVFQLLTGKHDITQLNRQSLESGGLKDIIDENLEGKFLESEAEKLAGLALVCTDESPHRRPTMENVMVELSDKW 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00753 677 SUPERFAMILY Protein kinase-like (PK-like) 386 673 IPR011009 -
Tsu04g00753 677 Gene3D Ribonuclease Inhibitor 182 249 IPR032675 -
Tsu04g00753 677 Pfam Protein tyrosine and serine/threonine kinase 431 672 IPR001245 GO:0004672|GO:0006468
Tsu04g00753 677 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 675 - -
Tsu04g00753 677 SUPERFAMILY L domain-like 28 238 - -
Tsu04g00753 677 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 5 675 - -
Tsu04g00753 677 Gene3D Transferase(Phosphotransferase) domain 1 487 676 - -
Tsu04g00753 677 Gene3D Phosphorylase Kinase; domain 1 385 486 - -
Tsu04g00753 677 Gene3D Ribonuclease Inhibitor 26 181 IPR032675 -
Tsu04g00753 677 ProSiteProfiles Protein kinase domain profile. 408 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g00753 677 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00753 Tsu-Chr4 7114813 7119198 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00753 1 521 Miscellaneous Gene Families AT4G22730 51.589 1.32e-174 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Tsu04g00753 PK_Tyr_Ser-Thr 2.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00753 - - qsu:111997683 894.419