Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00734 ATGGAACCATCTCAAGATAAACTCTTATGGAAGCATACTGACTCTGGTGACTTGCAGCTCAAGGAAGCTTACCATTTTAAAACTCAACAATTTCAAGACTTGTATTGGGCTAGCACCATTTGGAGCCCTGATATACCTCCCTCTAAATCTTTTCTGGCATGGAGATTAATGCATGACAAAGTGCCAACGGATGAAAATTTGATTCTTAGAGGTAACAATACTTGCAAATCCTCTTCCAACTCTATTAGAGACTTCACCTTCTTGAAATTGTTCCGAATCTCTATAAAGCatccaaaaatttcaattattaaaGAAGTTTGTTGGGAACCTCCTTTGGTAAATTGGACTAAATGCAACATTGATGGTGCTGCATGTGGTAACCCAGGTTTTGCCTCTTGTGGAGGTATTTTTAGGAACTTTACTGCTGATTTTGTCTTTGGTTTTGCTGAGCCTTTAGGCATTGTTTCTCCTCACTTTGCAGAGCTTTGTGGTGCGATGAGAGCTATTGAGATTGCTTATCAAAACAATTGGAATAACCTCTGGCTTGAAACTGATTCAACTTTGGTAGTTTCAGCTTTCCAAAATCCTGCAAAACCAATTGCATGGGCTTTAAGAAACAAATGGCAGAATGTTTTGCTCATGCTAAATCAAATGAATTGCATTGTCACTCACATTTATAGAGAAGGGTATCAAGTAGCTGATCTTATTGCCAATCATGGATTGTCTTTACCATCTATTGTTTTCTGGGATGTAGCTCCTATGTTTATATCAATGCCTAAACCATTCTTAACACAACACACATGGTACATTTCTACTCTTTCCTCTGTATTAGAGAATCCTCAACTCACAACAACCAAAAATCTCATTTCTTCCAAGTTCATTTACACCTACAAACATGTGATCAATGGTTTCAGTGCTAATCTATCACCAAAAGAACATGAAGCGCTCAAAAATTCACTAGGATACATTTCATCTGTAAAAGATTTACGGATGAAAGTAGACACAACATATTCACCTAAATTTCTTGGTCTCAAACCCAACATAGGTGCTTGGTATGATTCAAAATATGGTGAGGGTATAATTATTGGTTTGGTTGACTCGGGAATTTGGCCAGAGAGCAAGAGCTTCAATGATAACCAAATGTCCAAAATTCCTTCCAAATGGAAAGGAAGGTGTGAAAATAGCATCCATTTCAACTCATCCCTTTGTAATAAGAAACTTATTGGAGCTAAATTTTTCAATAAAGGATTATTAACAAAGAAGCCAAATGCAACCTTAGGTTTGAATTCCACACGTGACACACTAGGTCACGGAACCCACACTTCATCAACAGCAGCCGGAAGCAGAGTTGCTTCTGCATCTTACTTTGGTTATGCATCTGGAACAGCTTCAGGAGTTGCTTCGAGTTCGCATGTCGCAATGTATAAGGCTCTATGGAAAGAAGCTGATTTTTCATCTGATGTAATAGCCGCAATTGATGCTGCAATATCAGACGGTGTTGATATTCTATCATTATCATTTGGTTCTACAAAATTTGTACCTTTGTATGAAGATCCACTAGCCATAGCAACATTTGCAGCTATGGAAAAAGGTGTTTTTGTCTCGTGTGCAGCTGGAAATGGCGGTCCTGACCTTGAAACTCTTCACAATGGAATGCCTTGGGTGATAACTGTTGCCGCTGGTACTATGGATAGAGATTTTCAGGGGACTCTTACACTTGGAAATGGTAACAAAGTCATGGgattttctctttatttaggAACACTTTCTTCACATAATGTTCCGATTGTTTTCATGGGTTTATGTGACAATGCTAACGAATTGAAAAACGTGAAGAGAATGATTGTGGTGTGTGAAGACAAGAATGGAACTAGCCTTTCTGGTCAACTTTATAATTTGGATGAAGCAAAAGTTTATGGAGCTGTTTTGATTTCAAATGCCGCAGACACATACTATTCATCGGATGATTACATAATCGGTTTCCAGAATAGTTTGGCAGCCATCTTTGTTGACCCAATACATGGGGAAGTCATCAAAGCCTACATCAAGAGTTATTACAACTCTAAGCACTCTTCAATAGCAAGCATGTCTTTTAGGAAAACAGGTTTTGGTCTTAAAACTGCACCTAGTGTTGATTCTTACAGTTCAAGAGGGCCATCGTATAGCTGTCCATTTGTGTTGAAACCAGATATTACTGCACCCGGTACTTTGATCTTAGCAGCATGGCCTACAAATGTCACGGTGGCGCAAAAATATTTTAGAGATTTCAATTTGGAAACTGGAACATCTATGGCATGTCCTCATGTTGCTGGTGTCGCAGCGCTTGTGAAAGGCGCACACCGTAATTGGAGCCCTGCGGCTATTCGGTCGGCAATAATGACAACATCGGACATATTGGATAATACAAAGGAACACATCAAAGACATTGGAACAGATTATGTTAATCTTCTTTGTGCACTCAATTACACACAGAAAAACATCACTGCCATTACAAAATCCTCTTCCAATGATTGCTCTAAGCCTTCATTGGATCTTAACTACCCTTCTTTTATTGCTTTTTTCAATGGTGAAAATTCTTCTTCAAAGTCAATGCAAGAATTTCATAGAACAGTTACCAATGTTGGTGAGGGACAAGCAACTTATGTGGCTAGCATTACTCCAATTAAAGGGTTTCGTGTCACTGTTATCCCAAACAAATTGGTGTTCAATGAGAAGAATGAGAAGCTAAGCTTCAAGCTGAGGATTGAAGTTTCAACAACTACAAAATTAAAAGAAGTGGATTTTGGATATCTAACTTGGATGGATAGGAAGAAGCATGTTGTTAGGAGTCCAATTGTGGTCACAACCCTTAAATTGAAATCCTAG 2865 0.3818 MEPSQDKLLWKHTDSGDLQLKEAYHFKTQQFQDLYWASTIWSPDIPPSKSFLAWRLMHDKVPTDENLILRGNNTCKSSSNSIRDFTFLKLFRISIKHPKISIIKEVCWEPPLVNWTKCNIDGAACGNPGFASCGGIFRNFTADFVFGFAEPLGIVSPHFAELCGAMRAIEIAYQNNWNNLWLETDSTLVVSAFQNPAKPIAWALRNKWQNVLLMLNQMNCIVTHIYREGYQVADLIANHGLSLPSIVFWDVAPMFISMPKPFLTQHTWYISTLSSVLENPQLTTTKNLISSKFIYTYKHVINGFSANLSPKEHEALKNSLGYISSVKDLRMKVDTTYSPKFLGLKPNIGAWYDSKYGEGIIIGLVDSGIWPESKSFNDNQMSKIPSKWKGRCENSIHFNSSLCNKKLIGAKFFNKGLLTKKPNATLGLNSTRDTLGHGTHTSSTAAGSRVASASYFGYASGTASGVASSSHVAMYKALWKEADFSSDVIAAIDAAISDGVDILSLSFGSTKFVPLYEDPLAIATFAAMEKGVFVSCAAGNGGPDLETLHNGMPWVITVAAGTMDRDFQGTLTLGNGNKVMGFSLYLGTLSSHNVPIVFMGLCDNANELKNVKRMIVVCEDKNGTSLSGQLYNLDEAKVYGAVLISNAADTYYSSDDYIIGFQNSLAAIFVDPIHGEVIKAYIKSYYNSKHSSIASMSFRKTGFGLKTAPSVDSYSSRGPSYSCPFVLKPDITAPGTLILAAWPTNVTVAQKYFRDFNLETGTSMACPHVAGVAALVKGAHRNWSPAAIRSAIMTTSDILDNTKEHIKDIGTDYVNLLCALNYTQKNITAITKSSSNDCSKPSLDLNYPSFIAFFNGENSSSKSMQEFHRTVTNVGEGQATYVASITPIKGFRVTVIPNKLVFNEKNEKLSFKLRIEVSTTTKLKEVDFGYLTWMDRKKHVVRSPIVVTTLKLKS 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00734 954 Pfam zinc-binding in reverse transcriptase 20 75 IPR026960 -
Tsu04g00734 954 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 255 810 IPR045051 -
Tsu04g00734 954 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 811 951 IPR045051 -
Tsu04g00734 954 Gene3D Peptidase S8/S53 domain 359 811 IPR036852 GO:0004252|GO:0006508
Tsu04g00734 954 PRINTS Subtilisin serine protease family (S8) signature 433 446 IPR015500 -
Tsu04g00734 954 PRINTS Subtilisin serine protease family (S8) signature 357 376 IPR015500 -
Tsu04g00734 954 PRINTS Subtilisin serine protease family (S8) signature 760 776 IPR015500 -
Tsu04g00734 954 Pfam Subtilase family 357 797 IPR000209 GO:0006508|GO:0008236
Tsu04g00734 954 Pfam Peptidase inhibitor I9 266 332 IPR010259 -
Tsu04g00734 954 CDD Peptidases_S8_3 332 797 IPR034197 -
Tsu04g00734 954 Gene3D - 820 950 - -
Tsu04g00734 954 SUPERFAMILY Subtilisin-like 334 806 IPR036852 GO:0004252|GO:0006508
Tsu04g00734 954 Gene3D - 564 703 - -
Tsu04g00734 954 ProSitePatterns Serine proteases, subtilase family, serine active site. 761 771 IPR023828 -
Tsu04g00734 954 CDD RNase_H_like 118 238 IPR044730 -
Tsu04g00734 954 SUPERFAMILY Ribonuclease H-like 115 249 IPR012337 -
Tsu04g00734 954 Gene3D - 116 242 IPR036397 GO:0003676
Tsu04g00734 954 Pfam Fibronectin type-III domain 844 947 IPR041469 -
Tsu04g00734 954 Pfam Reverse transcriptase-like 119 239 IPR002156 GO:0003676|GO:0004523
Tsu04g00734 954 ProSiteProfiles Serine proteases, subtilase domain profile. 336 820 - -
Tsu04g00734 954 CDD PA_subtilisin_like 570 684 - -
Tsu04g00734 954 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 249 333 IPR037045 -
Tsu04g00734 954 PANTHER PUTATIVE-RELATED 255 810 - -
Tsu04g00734 954 PANTHER PUTATIVE-RELATED 811 951 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00734 Tsu-Chr4 6896702 6901025 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00734 245 954 Subtilisin-like Serine Gene Family AT5G67090 44.548 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00734 - - gmx:100786751 868.611