Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00732 ATGGCTATAAGATATTGTTACAAAGATTTGGTTCCTTTTGGTGCTATGGTTACCATGGAATGTATCAACGTTGCTTTGAATACTCTCTTCAAAGCTGCTACCTTAAAAGGAATGAGTTATCATGTCTTTGTTGTTTATGCTTATGCTGTTGCTGCTTTTGTTCTTCTTCCTTCACCCTTTATCTCCAAAAGATCAAGAGTGCTTCCTCCTCTAAGTAAACCCGTAATATACAAAATTGGTCTTCTTGGGGTGATTGGAAGTTCATCTCAGATTATGGGGTATACAGGTATTAGTTACAGTTCTCCTACACTGTCCTCAGCGATTAGCAACTTGGTGCCAGCTTTTACCTTCATACTTGCCATCATTTTCAGgaTGGAAAAGGTAGCTATAAGAAATTTAAGTAGTCAAGCAAAGGTGTTGGGCACCATAGTATCAATATCAGGAGCATTTATAGTGACACTATACATAGGACCACCAATCATCATTGCACTCAGATCTTCCCTTCCACTTCATCAACCAATTAACACTCCAAAACCATCAGATCAAAATTGGGCCATTGGTGGCCTTTTATTGACAGCTGAGTATATATTGGTTCCCTTATGGTACATTGTACAGGTACAAATCATGAAGGTGTACCCTGATGAACTAACAGTAATCTTCTATTACAACTTATGTGTAAGCATTATAGCTGCAGTTGTAGGTGTGATTAGTGAGCCAAATGCAAGTGCTTGGAAAATAGGATTCGACACATCACTTGCATCCATCCTTTGCTCGGGAATTTTTGGATCATTCTTGAACAATACAGTTCATGCATATGTACTACGTATAAAGGGGGCTGTATATGTTGCAATGTTCAAACCACTCTCAATTGTCATAGCTGTTGCCATGGGAGTTGTGTTCCTTGGTGATACTCTCCACCTTGGAAGTTTAATTGGAGCAACAATAATATCAATTGGATTTTATACTGTGATGTGGGGAAAAGCAACAGAAGAGGTGGTTGAAGATGTCCCTATCGGCGAAACACCAACTACACAAAATGTTCCTCTCTTGCAAGGCTATAAAACTGAAGTTGAAAACAAAATGCATACAAGTGTATAA 1098 0.3862 MAIRYCYKDLVPFGAMVTMECINVALNTLFKAATLKGMSYHVFVVYAYAVAAFVLLPSPFISKRSRVLPPLSKPVIYKIGLLGVIGSSSQIMGYTGISYSSPTLSSAISNLVPAFTFILAIIFRMEKVAIRNLSSQAKVLGTIVSISGAFIVTLYIGPPIIIALRSSLPLHQPINTPKPSDQNWAIGGLLLTAEYILVPLWYIVQVQIMKVYPDELTVIFYYNLCVSIIAAVVGVISEPNASAWKIGFDTSLASILCSGIFGSFLNNTVHAYVLRIKGAVYVAMFKPLSIVIAVAMGVVFLGDTLHLGSLIGATIISIGFYTVMWGKATEEVVEDVPIGETPTTQNVPLLQGYKTEVENKMHTSV 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00732 365 Pfam EamA-like transporter family 201 324 IPR000620 GO:0016020|GO:0016021
Tsu04g00732 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 327 - -
Tsu04g00732 365 PANTHER WAT1-RELATED PROTEIN 9 347 - -
Tsu04g00732 365 PANTHER WAT1-RELATED PROTEIN 9 347 IPR030184 GO:0016021|GO:0022857
Tsu04g00732 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00732 Tsu-Chr4 6877775 6882118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00732 1 356 Nodulin-like Gene Family AT3G28050 56.098 2.93e-137 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00732 - - gmx:100801438 547.74