Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00731 ATGGAACCACAACAACAGAAGATTTCAGGAGGAGCAGAAACACTTAAACATATGGCTCCCGGATCGTCAGTTTCTATTGCATATCACCCCAATTTTGGACCTCATGATGATCTTATCATTTTAGAGCTGGATGAGAAACTAGTCTCAGATGTTTTGAATGAAAGGATGGTCTTAAGAGGACAGCCTGATGAAGATGCAGTTCTTTGTACTCAATCAAAAACATATGCGATGAAGTTTGTTGGAACTTCAAATTCTGTTTTGCTGGTACCACCGGCAAATCGATCAGAATCATATGAAAACGTACAGACAAATGATAGTAATAATAGTGACGAGAAATCTGTTGCAAATGTAATAAAAGTTGTACCTGGTAATATGGAGCTTATTGAGGTTTCACCCAGACTTGATAAACTTAGATTGCTCCTTTTGGAGAACACTTACAGATTTGATGAGAATGACATGGAAACTTTAGAAGATAATCAGGAATCTAGAACAGGATTATATAGCTGGAATGATCTTATAGATAATATTCAAGCTAGTGACGAGGAATTAAGGTTTGGGTTGCAGGCTCTTTCTGCTGTGGAGATTAATGGGTATTGGAGATTAGTTGATGAGAGTTACATGGACATGATTCTGGGAATGCTTTTGAAAAATGCAGTATTGAATGATTGGTCACTCAACGCTCTAAATGAAGACGAAGTTGTGAATATGCTGGAATCAGACGGATTTCCGTTGGTACTTGCAAGGCATTGCTTGCATGTATATGGCAAGCAAGTAGAAGAAAACGATTGCATGGAAAGCTGTTTGTGGAAGTTGGATGAAAAGCGGGTATGCATACACTTTGCAAGAGAAATCCTGAAAGGAGGTAAGAAGAAGTTAGAGAATTTTATGGATGAATGGAGGAACAAGACTCCAGATGAAATGCATCCCACTTTTGATCTTATGGAAGGAGAGGTATTGACAGAGAAAATTGGAGTTGAGACATGGGTTCGTGCCTTCCGCGTGTCTTCTTTGCCTTCGACTCCAGCTGAACGTTTCTCCATTCTTTTCAGAGAGCGTGCGAAATGGGCTTGGAAAGATCTGCAGCCATATATCAGGGATCTGAATGTACCCGGTCTTTCTGCAGAAGGTATACTACTCAAATACACTCGAAAGACACAACCATCACCTAATGAAGATCCAGTTTTCAGTGCAAGATAG 1197 0.3977 MEPQQQKISGGAETLKHMAPGSSVSIAYHPNFGPHDDLIILELDEKLVSDVLNERMVLRGQPDEDAVLCTQSKTYAMKFVGTSNSVLLVPPANRSESYENVQTNDSNNSDEKSVANVIKVVPGNMELIEVSPRLDKLRLLLLENTYRFDENDMETLEDNQESRTGLYSWNDLIDNIQASDEELRFGLQALSAVEINGYWRLVDESYMDMILGMLLKNAVLNDWSLNALNEDEVVNMLESDGFPLVLARHCLHVYGKQVEENDCMESCLWKLDEKRVCIHFAREILKGGKKKLENFMDEWRNKTPDEMHPTFDLMEGEVLTEKIGVETWVRAFRVSSLPSTPAERFSILFRERAKWAWKDLQPYIRDLNVPGLSAEGILLKYTRKTQPSPNEDPVFSAR 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00731 398 Pfam Sister chromatid cohesion protein Dcc1 40 364 IPR019128 GO:0007064|GO:0031390
Tsu04g00731 398 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 18 398 IPR019128 GO:0007064|GO:0031390
Tsu04g00731 398 Coils Coil 139 159 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00731 10 398 C3H Transcription Factor Family AT2G44580 55.443 8.93e-160 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00731 K11271 - gmx:100817511 627.091