Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00717 ATGACAATATGGCCTATCATGGGAATGCTACCTAGTTTGATATACAATGTATCCAACTTCCCCAATTATATAAACTCAGTTTTGCAACAAAATGGAGGAACTATCATTTTTGAAGGACCATGGTTAACAAACATGAAGATTGTTTTCACAAGTGACTCCATGAATGTGCAACATATTACAAGTACAAAATTCGAAAACTATGGAAAAGGAAATGATTTCGAAGAAATTTTTGAAGTCCTTGGAGATGGAATTTTCAGATCTGATTTCCACATTTGGAAGTACAATAGAACACTACTTCATTCAATTTTCAAGCAGAAAAATTTTCAGGTATTTCTTCACAAaaccattgaaaaaaaaatctttagttcTCTTCTTGTGTTTCTTGATCATGCTTGTAAAAATGGGTTGCAAGTTGATTTGCAAGATATTTTTCAAAGGTTAACCTTTGACAATATATGTTGTATAGTTTTAGGATTTGATCCTATTTGTCTTTCTATTGATCTTCCTGAAATTGCATGTGAGAGAGCCTTTACTCAAGCAGAGATCACATTGTTCTATAGACATGTAAGGCCTAAAATCTTTTGGAAGCTGCAAAAATGGCTTCAAATTGGTGAAGAGAAAAAGTTTGCCGAAAATGTGAAAATCGTTGATAAAATGttgtattcaaaaatcaaatccaaaaaagAAATGCAAGGAGAACAAGAATTTGATTTGCTAAGTATCATTTTAAAACAAAGTATAGGAGATGGAAAAAATCCAATAGATGATGAAAATAAGTTTCTAAGAGACACATCAATTAATCTACTTGCAGCTGGTAGAGACACTATTAGTTCTACTCTTACTTGGTTTTTTTGGTTAGTGGCAACACACCCTTTTGTTGAAGCAAAGATTCTTGAAGAGATCAAAGAAAATTTACCATCAAGAAAGGATAATTGGAAATATTTAGGAGTAGAAGGACTTAACAAGTTAATTTATTTACATGCAACTTTATGTGAAGTTTTAAGGCTTTATCCACCAGTGCCTTTTGAACATAAATCATCAATGAAATATGATATTCTTCCTAGTGGACATAAGATTAAATCAAATACAAAGATATTGTATTCTCTATACTCAATTGGAAGAATGGAGAAGGTATGGGGAGAAGATTGCTTGGAATTCAAGCCAGAGAGATGGATTTCTAAGAAAGGAGGGATAATTCATGTACCCTCTTATAAGTTCATTGCTTTTAATGCTGGACCAAGGACTTGTTTGGGTAAGGATATAAGCTTTATTGAGATGAAAATGATTGCTTCATCAATATTGTTGAATTACCAAATTCAAGTTGTGGAAGATCATCCCATAATTCCAAGTATTTCTGTTGTCTTACACATGAGACATGGTTTGAAGGTTAATGTGAAAAAAAGAAGTATTTGA 1413 0.3121 MTIWPIMGMLPSLIYNVSNFPNYINSVLQQNGGTIIFEGPWLTNMKIVFTSDSMNVQHITSTKFENYGKGNDFEEIFEVLGDGIFRSDFHIWKYNRTLLHSIFKQKNFQVFLHKTIEKKIFSSLLVFLDHACKNGLQVDLQDIFQRLTFDNICCIVLGFDPICLSIDLPEIACERAFTQAEITLFYRHVRPKIFWKLQKWLQIGEEKKFAENVKIVDKMLYSKIKSKKEMQGEQEFDLLSIILKQSIGDGKNPIDDENKFLRDTSINLLAAGRDTISSTLTWFFWLVATHPFVEAKILEEIKENLPSRKDNWKYLGVEGLNKLIYLHATLCEVLRLYPPVPFEHKSSMKYDILPSGHKIKSNTKILYSLYSIGRMEKVWGEDCLEFKPERWISKKGGIIHVPSYKFIAFNAGPRTCLGKDISFIEMKMIASSILLNYQIQVVEDHPIIPSISVVLHMRHGLKVNVKKRSI 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00717 470 SUPERFAMILY Cytochrome P450 3 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00717 470 PRINTS P450 superfamily signature 271 288 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00717 470 PRINTS P450 superfamily signature 416 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00717 470 PRINTS P450 superfamily signature 328 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00717 470 PRINTS P450 superfamily signature 407 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00717 470 PRINTS E-class P450 group I signature 280 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00717 470 PRINTS E-class P450 group I signature 327 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00717 470 PRINTS E-class P450 group I signature 260 277 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00717 470 PRINTS E-class P450 group I signature 416 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00717 470 PRINTS E-class P450 group I signature 406 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00717 470 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 409 418 IPR017972 GO:0005506|GO:0016705
Tsu04g00717 470 PANTHER CYTOCHROME P450 1 468 - -
Tsu04g00717 470 Gene3D Cytochrome P450 2 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00717 470 Pfam Cytochrome P450 4 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00717 470 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00717 Tsu-Chr4 6711380 6712792 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00717 1 469 Cytochrome P450 AT2G23180 45.021 3.36e-154 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00717 - - gmx:100785815 650.588