Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00701 ATGCCAAGTGTGGCTGTAAAACTCTACAGCGTATTCTTCAAGTTCCTCTTGAAGCACCGTTTACAAAACCGTATTCAATCTCAACCCGATTTAAATAACACCACCAACAACTCTAACTCTTTTGGTATCACTTCACGACCCGAAGAAACCGTCGCTAATTCTAATCCTTCTTTTACCGACGGTGTCGCTACCAAAGACATTCACATCGATCCTTTCACTTCTCTTTCAATTCGAATTTTTCTTCCTCAATCTGCACTTTCACCACCCGAACCTAATTCCAAACCTAAAAAACAAGATCCCGAACCTGGATCTACTACTTCGCGACGAAATAGCTACGGTCCACCGTATAAGGAAGATGAGTTCCGAGGGAATTTGTTTGGTGGTAGTACCGGTAGTAATGGTGTTGAGAGTTTGAATTTGATGGGAGCTGGTGTTAATGGTGGTGCTGGATTATATAGAGGCTATTCGCCGCCGGCGTTGGATAATCGACGGAGGAGGTTACCGGTGATGTTGCAGTTTCATGGTGGTGGTTGGGTTAGTGGGAGTAATGATTCTGTTGCGAATGATTTGTTTTGTAGACGAATTTCGAAGCTTTGTGATGTGATTGTTGTTGCTGTTGGGTATAGGTTAGCGCCCGAGAGTCGGTATCCGGCGGCTTTTGAGGATGGTTTGAAGGTTTTGAATTGGTTGGCGAAACAGGCGAATTTGGCTGAGTGTAGTAAGTCTATGGAGGTTGGTAGGGTTGGCGGAGGTAGTCATGGTGGTGGTGAGTTTAATAAATCAGATGGTCATAGACATATTGTTGAGTCGTTTGGAGCTTCCGTTGTTGAGCCTTGGTTGGCTAGTCATGGAGATCCATCGAGATGTGTTCTTCTTGGAGTCAGTTGTGGTGCGAATATTGCAGACTATGTGGCTCGAAAATGTGTGGAAGGAGGCAAGCTTTTCGATCCTGTCAAGGTGGTAGCACAGGTCTTGATGTACCCATTTTTTGTTGGAAGTGTTCCCACACATTCTGAAATAAAATTGGCAAACTCCTACTTTTATGACAAGGCTATGTGCACACTTGCATGGAAACTTTTCTTACCCGAGGACGAATTTAGTTTGGACCATCCGGCTGCTAATCCCTTGATCTCAGGCCGGTCTCCTCCTTTAAAGTTGATGCCTCCAACATTGACAGTGGTGGCAGAACATGACTGGATGAGGGATCGTGCCATTGCTTACTCAGAGGAGCTCCGGAGGGTAAACGTTGATGCACCTGTTCTCGAGTATAAGGATGCAGTACATGAATTTGCGACACTTGATGTACTAATCAAAAGCCCCCAAGCCCAGGTTTGTGCTGAGGACATTGCCATCTGGGTCAAGAAATATATTTCACTTCGAGGTCACGAATTCTCGTATTGA 1401 0.4511 MPSVAVKLYSVFFKFLLKHRLQNRIQSQPDLNNTTNNSNSFGITSRPEETVANSNPSFTDGVATKDIHIDPFTSLSIRIFLPQSALSPPEPNSKPKKQDPEPGSTTSRRNSYGPPYKEDEFRGNLFGGSTGSNGVESLNLMGAGVNGGAGLYRGYSPPALDNRRRRLPVMLQFHGGGWVSGSNDSVANDLFCRRISKLCDVIVVAVGYRLAPESRYPAAFEDGLKVLNWLAKQANLAECSKSMEVGRVGGGSHGGGEFNKSDGHRHIVESFGASVVEPWLASHGDPSRCVLLGVSCGANIADYVARKCVEGGKLFDPVKVVAQVLMYPFFVGSVPTHSEIKLANSYFYDKAMCTLAWKLFLPEDEFSLDHPAANPLISGRSPPLKLMPPTLTVVAEHDWMRDRAIAYSEELRRVNVDAPVLEYKDAVHEFATLDVLIKSPQAQVCAEDIAIWVKKYISLRGHEFSY 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00701 466 Pfam alpha/beta hydrolase fold 170 431 IPR013094 GO:0016787
Tsu04g00701 466 PANTHER ARYLACETAMIDE DEACETYLASE 20 446 - -
Tsu04g00701 466 MobiDBLite consensus disorder prediction 84 128 - -
Tsu04g00701 466 MobiDBLite consensus disorder prediction 27 57 - -
Tsu04g00701 466 PANTHER CARBOXYLESTERASE 16-RELATED 20 446 - -
Tsu04g00701 466 SUPERFAMILY alpha/beta-Hydrolases 130 457 IPR029058 -
Tsu04g00701 466 Gene3D alpha/beta hydrolase 19 460 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00701 Tsu-Chr4 6473165 6478123 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00701 1 466 Carbohydrate Esterase AT3G27320 70.601 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00701 - - gmx:100775445 726.472