Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00661 ATGGTTGATATTTTCTCCATCATATTAACTTTCATCTCAATCTTTGCAATTGCTTGTGTTGTTAAATATCTTACCAACAAAAGTTCCTCACACAAATTGCCTCATGGAAGTATGGGGTGGCCATTCCTTGGAGAGACTCTTGACTTCCTCAAGCCTCATAAATCAAATTCTTTAGGAAGCTTCTTACAAGAACGTTGTTCTAGGTATGGAAGAGTTTTCAAGTCGCATATGTTTGGCTATCCCACCATAGTTTCATGTGACTTTGAACTCAACATGTTTATTCTTCAAAATGAAGGGAAACTATTCCCTGTTGATTACCCTAAGGTAATGCACAAGATCTTAGGGAAATTCTCTCTGCTTCTAGCCAAAGGAGAGCTTCACAAGAAGCTAAGAAGCACAGTTATCAGTTTTGTTAGTGCATCAAAATGTGAATCCAACTTCATTCACTCTGTAGAAATGCTTGTACTCTCAATGATTCACTCATGGGGTTCAAACTGTACACAAGTTACATTCTATAAAGAAGCTAAAAGGTTCTCCATCAATGTTATGCTGAAGCACCTTCTGAATATCAATCCTGATGAACCAATAGCCTCAAAGATTTTGGAGAACTTTGAGAATTATATAAAGGGTTTCATTTCATTGCCATTAAATATTCCAGGGACTACATACTTCAAAGCTGTGAAGGCTAGAATAAGACTCTCATCTATTATCCAAGATATTATCATAGAGAGACGTAGTAAAGTTGATAATGTGGGGACTGTGGAAGGTGGAGACCTCTTGAAtttgattttatcaaaacagaaTTTAAGTGATGAAGAGAGGGTTGGCATTGTTTTGGATCTTTTGTTTGGAGGATATGAAACAACCTCAAAACTTCTCTCTATGATTATCTATTTTCTTGATGGAGCCCCTAATGCTTTAGAAAGATTAAAGGAAGAGCATGAAGTGATAAGGAAAAGTAAAATGGAAGGAGAGCTATTGAATTGGGAAGACTATAAACATATGGAGTTCACTCAAAATGTGATTTATGAAGCTATGAGATGTGGGAATGTTGTCAAATATCTTCATAGGAAAGCTATTCAAGATATCAAATTCAAAGGGATTGTAATACCTGCAGGATGGAAGGTTCTTCCTGTCTTGACAGCACCACATTTGGATCCCAGCCGTTTTGAAAATCCTTTGGAGTTCAATCCCTTCCGATGGAATGACAATTCAACAAGCCAGAAAGTTGCACCATTTGGTGGTGGTCCACGTCTCTGTCCAGGGGCTGATCTAGCTAAAGTGGAGATAGCATTCTTCCTTCATCATCTTATCCTTAATTATAGAGTTTTGTGCCTTcttgagaaaaaagaaaactacGATATAATAACTCCAAAGTTAGTCCAATTAGCAAACACCTTCTCCGATTCATTCACTGACCTCACAATCTCCATCTTCCACTTCCGTTTGTTTTCAGGGCCGGTTCAAATTTCTAGTATGACTAAGTCGTTGGATATTCCTCCTAAGGGTGGATTCAGTTTTGATCTCTGCAGAAGAAATGATATGCTCGAAAAGAAGGGTCTTAAAGCCCCTACTTATTTGAAGACTGGAACCACGATTGTTGGTTTAGTTTTCAAGGATGGTATCATTCTTGGAGCAGATACCAGGGCAACCGAAGGACCCATTGTCGCTGAtaaaaattgtgagaaaattCATTATATGGCACCCAACATATATTGTTGTGGAGCAGGCACTGCTGCTGATACTGAAGCTGTAACAGACATGGTTAGCTCACAACTGCAACTACATCGCTACCATACTGGCCGTGAATCAAGAGTTGTTACAGCACTGACACTTCTTAAGAGACACCTTTTCAATTACCAAGGTCATGTGTCAGCTGCACTAGTTCTTGGTGGAGTTGACATCACTGGACCGCATTTACACACTATCTATCCACATGGGTCAACTGACACCCTTCCATTTGCTACAATGGGATCTGGTTCACTTGCTGCAATGTCTGTGTTTGAGTCCAAGTACCAGGAAAACTTGACTAGGGAACAAGGAGTCAACTTAGTTGTTGAGGCAATTTGTGCTGGTATATTTAATGACTTGGGAAGTGGAAGTAATGTTGATGTTTGTGTGATAACCAGGGGTAATAAGGAATATCTAAGGAATCACCTCCAGCCAAATCCTCGTACTTTTGTCAATCCAAAAGGCTTTACCTTCTCCAAAAAGACTGAGGTTCTTTCAACAAAAATTACTCCTTTGAAGGAGAAGGTTGAAATAATTGAAGCAGATGCTATGGAAGAGTAA 2292 0.3835 MVDIFSIILTFISIFAIACVVKYLTNKSSSHKLPHGSMGWPFLGETLDFLKPHKSNSLGSFLQERCSRYGRVFKSHMFGYPTIVSCDFELNMFILQNEGKLFPVDYPKVMHKILGKFSLLLAKGELHKKLRSTVISFVSASKCESNFIHSVEMLVLSMIHSWGSNCTQVTFYKEAKRFSINVMLKHLLNINPDEPIASKILENFENYIKGFISLPLNIPGTTYFKAVKARIRLSSIIQDIIIERRSKVDNVGTVEGGDLLNLILSKQNLSDEERVGIVLDLLFGGYETTSKLLSMIIYFLDGAPNALERLKEEHEVIRKSKMEGELLNWEDYKHMEFTQNVIYEAMRCGNVVKYLHRKAIQDIKFKGIVIPAGWKVLPVLTAPHLDPSRFENPLEFNPFRWNDNSTSQKVAPFGGGPRLCPGADLAKVEIAFFLHHLILNYRVLCLLEKKENYDIITPKLVQLANTFSDSFTDLTISIFHFRLFSGPVQISSMTKSLDIPPKGGFSFDLCRRNDMLEKKGLKAPTYLKTGTTIVGLVFKDGIILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKRHLFNYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFESKYQENLTREQGVNLVVEAICAGIFNDLGSGSNVDVCVITRGNKEYLRNHLQPNPRTFVNPKGFTFSKKTEVLSTKITPLKEKVEIIEADAMEE 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00661 763 ProSiteProfiles Proteasome beta-type subunit profile. 530 708 IPR023333 -
Tsu04g00661 763 CDD proteasome_beta_type_7 531 719 - -
Tsu04g00661 763 Pfam Cytochrome P450 34 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00661 763 PRINTS P450 superfamily signature 340 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00661 763 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00661 763 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00661 763 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00661 763 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
Tsu04g00661 763 PANTHER CYTOCHROME P450 26 36 447 - -
Tsu04g00661 763 SUPERFAMILY Cytochrome P450 30 449 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00661 763 Gene3D Cytochrome P450 23 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00661 763 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 531 763 IPR029055 -
Tsu04g00661 763 PRINTS E-class P450 group I signature 379 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00661 763 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00661 763 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00661 763 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00661 763 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00661 763 Pfam Proteasome subunit 528 708 IPR001353 GO:0005839|GO:0051603
Tsu04g00661 763 ProSitePatterns Proteasome beta-type subunits signature. 534 581 IPR016050 GO:0005839|GO:0051603
Tsu04g00661 763 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 500 719 IPR029055 -
Tsu04g00661 763 PANTHER CYTOCHROME P450, FAMILY 724, SUBFAMILY A, POLYPEPTIDE 1 36 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00661 Tsu-Chr4 6157531 6172678 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00661 38 367 Cytochrome P450 AT5G14400 55.589 2.83e-131 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00661 K12639 - gmx:100791737 683.715