Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00651 ATGGCTAGGAGCTGCTGGCTTTTTAACAAAGGGGGATTTGCAACGAAATTGAAAAGCACTACACTCTCTTTAGCTGATCAGATCAAGGATTGCGGCGCATATTGCGAATGTCCAAACTGTCATCATCGTATAGACAACAGTGATGTTTCGTGGCCTGGCCTTCCTCTTGGTACAAAGTTTGATCCTTCTGATGTAGAACTATTGGAACATTTAGCAGCTAAATGTGGTGTTGGGAACTTAGAGCCTCACATGTTTATTGAAGAGTTCATCCCAATATTGGAAGGAGACCAAGGCATTTGCTATACACATCCTGAAAATCTTCCAGGTGCTAAGAAAGATGGGAGTAGTGTTCATTTCTTTCACAGAACAATGAATGCATATAGTGTTGGTCAGCGAAAGCGTCGAAAGATTCATCATCGTGATTCAACTGAAGCCCATGTACGCTGGCACAAGACTGGTAAGACCAAAGCTATAATAGaaaatggagtacataagggTTTTAAAAAGATCATGGTTCTATATATAAGATCTGAGAAAGAATCCAAGTCCTACAAATCCGACTGGAAAATGCATCAGTACCATCTAGGGACTGATGAAGATGAGAAGAATGGAGAATATGTggtttcaaaaatattttataaacaggTTGATAAAATCGAGGAGAAACCAATGGCTGAAGAACCTGACAATATAACATCACGAACAAGTCCAAGGACTCCAAAACCAAATCCTCTAAATCCACCGCGCACAGGAAAATGTGTTGAAAATGATGATAACATTGATGAAACTACACTTTTGTCATTTGCACAGGATGCCAAGTCTATCCCTGCAGAATCACATACCCCTCAATCTGATATTCTGGATCACAACAGCACAGAAAACTCGGCATGGTTGGCTGGTGTATCACAGGCTTTGGAAAAATCCTATTATGATGGCTTGGATGACATATTATTTTGCAAAGAGATTTTAGATTCATCTACTCtatttgatgaatttggatTGGACTCAATCACTTCCAACGACCTTCCATATTATGAAAACAAAATGACGGAAAACGGTAATGTAACTAGTGGAACATCAACTTCTGTCCTGGATACATTGGAATTGAGTAATCCTCCAGAAAACTCGGCATGGTTGGCTGGTGAATCACAGGCTTTGGAAAACTCTGAATATAAGGAtgacttattattgtgcaaggAGATTTTAGATTCGTCTGCTCTACTTGATGATTCTGGATTGCACTCGATCACTACCAAGGACATCGCATACTATGATAACAGAATGACGGGAAACGATAATATAACTAGTGGAACAACATCAACTTCTGTCCTCGATACACTGGAATTGGGCACTCCTCCAGATTTTGATCTTACGAATTTGACATTTGGTTCTCAAGACAGCATCCTTGACTGGGTGGACCGGTTATGA 1428 0.3824 MARSCWLFNKGGFATKLKSTTLSLADQIKDCGAYCECPNCHHRIDNSDVSWPGLPLGTKFDPSDVELLEHLAAKCGVGNLEPHMFIEEFIPILEGDQGICYTHPENLPGAKKDGSSVHFFHRTMNAYSVGQRKRRKIHHRDSTEAHVRWHKTGKTKAIIENGVHKGFKKIMVLYIRSEKESKSYKSDWKMHQYHLGTDEDEKNGEYVVSKIFYKQVDKIEEKPMAEEPDNITSRTSPRTPKPNPLNPPRTGKCVENDDNIDETTLLSFAQDAKSIPAESHTPQSDILDHNSTENSAWLAGVSQALEKSYYDGLDDILFCKEILDSSTLFDEFGLDSITSNDLPYYENKMTENGNVTSGTSTSVLDTLELSNPPENSAWLAGESQALENSEYKDDLLLCKEILDSSALLDDSGLHSITTKDIAYYDNRMTGNDNITSGTTSTSVLDTLELGTPPDFDLTNLTFGSQDSILDWVDRL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00651 475 MobiDBLite consensus disorder prediction 222 256 - -
Tsu04g00651 475 PANTHER NAC DOMAIN CONTAINING PROTEIN 44-RELATED 3 374 - -
Tsu04g00651 475 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 3 374 IPR044799 GO:0003700
Tsu04g00651 475 Pfam No apical meristem (NAM) protein 55 195 IPR003441 GO:0003677|GO:0006355
Tsu04g00651 475 SUPERFAMILY NAC domain 45 214 IPR036093 GO:0003677|GO:0006355
Tsu04g00651 475 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 374 473 IPR044799 GO:0003700
Tsu04g00651 475 PANTHER NAC DOMAIN CONTAINING PROTEIN 44-RELATED 374 473 - -
Tsu04g00651 475 ProSiteProfiles NAC domain profile. 54 214 IPR003441 GO:0003677|GO:0006355
Tsu04g00651 475 Gene3D NAC domain 63 218 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00651 Tsu-Chr4 6058145 6062199 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00651 37 223 NAC Transcription Factor Family AT1G28470 50.000 2.83e-60 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tsu04g00651 NAM 1.5e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00651 - - mtr:MTR_7g033320 597.816