Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00640 ATGGAAAAACACCACCCTATGAGTAACAAACAATCCTCTCATGACAGCTACGAGAAAACAACCGAATTCCGGCCATTCTCGCCGGCGGTAACGCCTCATATGCGTACATTTCACCTATCATGGTTCAACCTCTTCTCATGTTTCTTCACCACCTTCTCTATCCCTCCTCTCCTCCCCATCATCCGCGATGACCTCAACCTCACAGCCGCGGACATAGGCACAGCCGGCTCCGCCTCTTTTGCCGGCTCCATCCTCTCCCGTCTCTTGATGGGACCTATCTGTGACCTTGTAGGTCCTCGTAAAGCTTCAGGTATTCTTTCTCTCATAACCGCACCCATCATCCTCATCACTTCCATCGCCTCTACTCCAGGCGAATTCATTGTCGTTCGCTTTCTTGTCGGCTTCTCTCTAGCCACTTTTGTTGCAAACCAATACTGGATGACCTCAATGTTCTCTGAAACCGTTGTTGGCTCAGCCAACGCTTTCGCCGCTGGCTGGGCCAATACCGGTGCCGGAGTCACACAACTTCTTATGCCTATAATTTATTCATCTATCTTATATTTCCCACATGTTTCATCCTCAACCGCTTGGCGGTTATCATTCATAGTTCCCGCCGTTTTTCAAACCATTACAGGCATCTTAGTTTTAGTATTCGGCCAcgacaacaaaaacaaaaacaaaaaccagtATCCTCCAACTACTCCTCTGGATTCAATAAATCCAAAGGAGAGTCTGGAGAGTACATTAAAGGTGATTTTTCGCGGGTTAGGCGATTATAGAGGATGGATATTAGCATTACTTTACGGATTCTCGTTTGGGGTTGAAATGACAACAGATAACATAATAGCAGAATATTTTTATGATAGATTTGGCGTGAATCTACAAAGTGCAGGAACAATTGCAGCATGTTTTGGGATGACAAATTTCTTTGCAAGACCAATGGGAGGGTTTGTATCAGACAAAATGGGGAAGAGATTTGGTGTGAGAGGAAGATTGTGGAGTTTGTGGATTGTGCAAACGGTGGCGGGTTTGCTTTGTGTGTTACTTGGACGAGTTAACTCGTTGTGGAGTTCTATTATTGTTATGTGTTGTTTTTCAGCTTTTGTTCAAGCTGCTTCTGGCCTAATATTTGGTGTGGTCCCTTTTGTTTCTAAAAGATCACTAGGTGTAATATCAGGAATGACAGGAAGTGGTGGAACTATAGGAGCTGTTGTGACTCAAATGCTTTTGTTCTCAGGTGACAAATTATCAAAGCAAACAAGCATATCATTAATGGGTCTAATGATGATATTATGTACTCTTCCTGTAACCTTGATCTACTTTCCTCGATCGGGCGGCATCTTTTGTGGTCCTTCTGcagatcatgatgatgatgatgaagaagaaaattataGTTTGTTGGAGTAG 1407 0.4222 MEKHHPMSNKQSSHDSYEKTTEFRPFSPAVTPHMRTFHLSWFNLFSCFFTTFSIPPLLPIIRDDLNLTAADIGTAGSASFAGSILSRLLMGPICDLVGPRKASGILSLITAPIILITSIASTPGEFIVVRFLVGFSLATFVANQYWMTSMFSETVVGSANAFAAGWANTGAGVTQLLMPIIYSSILYFPHVSSSTAWRLSFIVPAVFQTITGILVLVFGHDNKNKNKNQYPPTTPLDSINPKESLESTLKVIFRGLGDYRGWILALLYGFSFGVEMTTDNIIAEYFYDRFGVNLQSAGTIAACFGMTNFFARPMGGFVSDKMGKRFGVRGRLWSLWIVQTVAGLLCVLLGRVNSLWSSIIVMCCFSAFVQAASGLIFGVVPFVSKRSLGVISGMTGSGGTIGAVVTQMLLFSGDKLSKQTSISLMGLMMILCTLPVTLIYFPRSGGIFCGPSADHDDDDEEENYSLLE 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00640 468 ProSiteProfiles Major facilitator superfamily (MFS) profile. 36 444 IPR020846 GO:0022857
Tsu04g00640 468 Pfam Major Facilitator Superfamily 41 405 IPR011701 GO:0022857|GO:0055085
Tsu04g00640 468 PANTHER HIGH AFFINITY NITRATE TRANSPORTER 2.7 8 463 - -
Tsu04g00640 468 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 8 463 IPR044772 GO:0015112
Tsu04g00640 468 Gene3D MFS general substrate transporter like domains 242 447 IPR036259 -
Tsu04g00640 468 CDD MFS_NRT2_like 37 438 IPR044772 GO:0015112
Tsu04g00640 468 Gene3D MFS general substrate transporter like domains 32 229 IPR036259 -
Tsu04g00640 468 SUPERFAMILY MFS general substrate transporter 7 440 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00640 Tsu-Chr4 5969348 5971905 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00640 15 461 Inorganic Solute Cotransporters AT5G14570 61.638 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00640 K02575 - cit:102627329 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g00640 04 5969348 5971905 Tsu04g00640 04 5969348 5971905 ECH