Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00625 ATGGAAGAAGAAAACAATACCAGAACCAGTAACTCCACCGCAACAATGGATCCAAAAACCGGGTTCAACTCAATTTCCAGAACCTTCCAAACTCTAAGACCCCCACTAAACCTTCCACCACCAAACGCCACAATCTCCGCCACAACCTACATTCTCTCCCTCCGTCACAAATCCCCTTACTCCTCCTCCATCACTTTCCTCATCGACTCAACCACATCTCACCATCTATCTTACTCCAACTTCATCCAACGCTCACAAACCCTCGCAAAAAACCTCACTCTCCGCGGACTCACCAAACACCACACCGCATTGATACTTTCCCCAAACATTTTCCAGGTTCCAATCCTCTACTTCGCATTACTCTCCATCGGAGTCATCGTTTCACCCGCAAATCCAATTTCAACTGATTCCGATATTTCTCATTTCATAAATCTCTCTAAACCTGTGATCGCTTTTACGACGTCGTTTTATGGAAAACTTCCCAAATTACCTCTCGGAACGATTCTCATTGACTCGCCCGAGTTCGACTCACTCACCACCACGGAAGAAGATAAAGGTAATAGTTCAACGGCAGTATTACCGGAGGTGAGTCAATCTGACGTGGCGGCGATTCTATACTCATCAGGGACTACAGGAAAATCGAAAGGAGTAATGCTTACACATCGGAATTTGACGGCGGCGGTGGCGGCGCATGACGCTGTTCGGATTCAGAAAGAGAGTCCTGCGGTGTGTTTAGTTACGGTACCGTTTTTTCATGTGTATGGTTTTATGTTCCTGTTGAGATCTTTGGCTATGATGGAAACGGTTGTGGTGATGGAGAGATTTGGATTTGGGAAAATGTTGAGTGTTTTGGAAAGGTTTCGAGTGAGTAATCTTGTGGTGGCACCGCCGGTGGTGGTGGCGATGAGTAAAGAGGGAGTGACGGATGGGTATGATTTGTCGTCGTTGAAAAATGTTGTTTGTGGCGGTGCTCCGTTGGGAAAGGATAATTTTGATGCTTTCAAAGCAAAATTTGCTCAAGTTTCTATTATTCAGGGATATGGTTTAACCGAATCAACAGCCGGTGTTATCCGAATACTAAGTCCTGAGGAAGCTACGCGGGCAGGAACTACGGGTAGGCTGGTTTCAGGGGTGGAAGCTAAAATAGTGAACCCCAACACAGGAGAGGCAATGTCTCAAGGTGAACAAGGCGAACTTTGGGTTAGAGGACCTCCAATTATGAAAGGTTATGTTGGGGATCCAGTGGCAACTTCTGACACTTTAGTGGATGGATGGTTGAGAACTGGGGATATTTGCTATTTTGACAATGAAGGTTTCGTGTATGTTGTAGACAGGTTGAAAGAATTGATCAAATATAAAGGCTACCAGGTACCTCCTGCAGAGCTGGAACAGCTACTCCAGTCTCACCCAGAGATAAAAGATGCTGCAGTTATTCCATACCCTGATGAGGATGCTGGTCAGGTTCCCCTAGCTTTTGTGATAAGGCAACCTCAAAGCTCCATGGGTGAAGCAGAAATAATAGATTTTGTAGCCAAACGGGTTGCACCATACAAGAAAATAAGGCATGTGGTATTTGGCAATTCCATACCAAAGAATGCAGCAGGAAAGATACTAAGGAAGGACTTGTTGAATAAAATTCTCCATCAACAAACTTTCAGTAGCTCCACTCCTGATTGTATTACCCATCTTATTGATAACGGAAATCATGGTCAGACTCAGAGTACATCATTTAAGTTACATGCTGAAATAAAAGGGAAGTACAAAGAAGTTGCATTTTTCCAACTTCCAAACTAA 1794 0.4437 MEEENNTRTSNSTATMDPKTGFNSISRTFQTLRPPLNLPPPNATISATTYILSLRHKSPYSSSITFLIDSTTSHHLSYSNFIQRSQTLAKNLTLRGLTKHHTALILSPNIFQVPILYFALLSIGVIVSPANPISTDSDISHFINLSKPVIAFTTSFYGKLPKLPLGTILIDSPEFDSLTTTEEDKGNSSTAVLPEVSQSDVAAILYSSGTTGKSKGVMLTHRNLTAAVAAHDAVRIQKESPAVCLVTVPFFHVYGFMFLLRSLAMMETVVVMERFGFGKMLSVLERFRVSNLVVAPPVVVAMSKEGVTDGYDLSSLKNVVCGGAPLGKDNFDAFKAKFAQVSIIQGYGLTESTAGVIRILSPEEATRAGTTGRLVSGVEAKIVNPNTGEAMSQGEQGELWVRGPPIMKGYVGDPVATSDTLVDGWLRTGDICYFDNEGFVYVVDRLKELIKYKGYQVPPAELEQLLQSHPEIKDAAVIPYPDEDAGQVPLAFVIRQPQSSMGEAEIIDFVAKRVAPYKKIRHVVFGNSIPKNAAGKILRKDLLNKILHQQTFSSSTPDCITHLIDNGNHGQTQSTSFKLHAEIKGKYKEVAFFQLPN 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00625 597 MobiDBLite consensus disorder prediction 7 21 - -
Tsu04g00625 597 Gene3D - 448 549 IPR045851 -
Tsu04g00625 597 Gene3D - 38 447 IPR042099 -
Tsu04g00625 597 MobiDBLite consensus disorder prediction 1 21 - -
Tsu04g00625 597 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 17 545 - -
Tsu04g00625 597 Pfam AMP-binding enzyme C-terminal domain 461 536 IPR025110 -
Tsu04g00625 597 Pfam AMP-binding enzyme 65 452 IPR000873 -
Tsu04g00625 597 CDD 4CL 44 542 - -
Tsu04g00625 597 SUPERFAMILY Acetyl-CoA synthetase-like 68 547 - -
Tsu04g00625 597 ProSitePatterns Putative AMP-binding domain signature. 204 215 IPR020845 -
Tsu04g00625 597 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 17 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00625 Tsu-Chr4 5826374 5831387 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00625 10 542 Monolignol Biosynthesis Gene Families AT5G63380 48.905 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00625 - K01904 gmx:100801143 681.019