Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00599 ATGGAAGATCTTAAAAAGTTGGTTTATCTACATGGAGCTTTGTGTGAAGCCTTAAGACTTTATCCACCAGTGCCTTTTGATCATAAATGTTCATTGAAACATGATATACTTCCTAGTGGACATAAGATTAAGTCAAATACAATAATACTATATTCTTTGTATTCAGTTGGAAGAGTGGAAGAAATTTGGGGAGAAGATTGCTTGGAATTCAAGCCAGAGAGGTGGATTTCAAAGAAAGGAGGGATAATTCATGTACCCTCTTATAAGTTCATTGCTTTTAATGCTGGACCAAGGACTTGTTTGGGTAAGGATATAAGCTTCATTGAGATGAAAATTATTGCTGCAACAATATTGTTGAATTATCATATTAAGGTGATGGAATGTCATCCTATAAAATAA 399 0.3358 MEDLKKLVYLHGALCEALRLYPPVPFDHKCSLKHDILPSGHKIKSNTIILYSLYSVGRVEEIWGEDCLEFKPERWISKKGGIIHVPSYKFIAFNAGPRTCLGKDISFIEMKIIAATILLNYHIKVMECHPIK 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00599 132 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 132 - -
Tsu04g00599 132 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 93 102 IPR017972 GO:0005506|GO:0016705
Tsu04g00599 132 PRINTS E-class P450 group IV signature 58 76 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00599 132 PRINTS E-class P450 group IV signature 7 23 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00599 132 PRINTS E-class P450 group IV signature 100 118 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00599 132 PRINTS E-class P450 group IV signature 84 100 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00599 132 Gene3D Cytochrome P450 1 132 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00599 132 PANTHER CYTOCHROME P450 1 132 - -
Tsu04g00599 132 Pfam Cytochrome P450 1 127 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00599 132 SUPERFAMILY Cytochrome P450 1 127 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00599 Tsu-Chr4 5611853 5612251 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00599 2 132 Cytochrome P450 AT4G39480 63.359 1.08e-62 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00599 - - qsu:112021020 214.542