Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00597 ATGGGTTCATTCATCACTTTGCTTCTTTCATTTCAACCTCtttcattcatcttcttcctcctcttctACATAATATTCATCGAGTATCGACGAATTAAGAAATATGTAGGATTCAGCCCAACAACCTATCCAGTAATAGGTTGTTTGATATCCTTCTATAAGAACCGTTTTCGGTTGCTTGATTGGTACACGGAGCTTTTAGCCCAATCGCCAACCAACACAATATTGGTTCAGCGATTAGGTGCACGTAGAACGATTGTAACTGCAAATCAACACAACGTTGAGTACATATTGAAGACCAATTTTAAGAACTTCCCCAAAGGGAAGCCATTCACGGAAATTCTTGGTGATTTCCTTGGTAAAGGTATATTTAACGTGGATGGTGATTTATGGATGAAACAGCGAAAACTAGTAAGTCACGAGTTTTCGCTGAGATCCATAAACGAGTTCTTCGTGAATACATTGGAGGAAGAAGTGAATGGAAAACTATTACCATTCATGGATTCACTATCAATAGAGAACAAAGTGGTTAACTTTCAAGAGTTGTTGGGAAGATTCTCTTTCAATGTAATTTGCAAATTCACTTTAGGGATTAATGATGATAATGGTAACAATAGGTGTTGTTTGGATCCATTTTTTCCAATTTCGCCATTGGCGAGGGCTTTTGATGTGGCGGCCGAGATTTCAGCTAGGCGAGGAGCGGCGCCTTTGTTTTTGGTGTGGAAAGTGAAGAAGTGGCTTGGAGTTGGATCGGAAAAGAAGCTTAGAGAGGCAGTTAACGAGGTTAAGACACGTGTCATGAAAATTATTttggagaagaaaaagaagatgaatGTAACAGGAGAGGAGCTTGATGGTGTTCAAGATCTCTTGTCACGTCTTATTTCTTCAGGTCATGATGAGGAAGTAATTAGGGACATGATGATAAGTTTCATTATGGCAGGGAGGGACACAACATCATCAGCAATGACATGGTTCTTTTGGTTACTATCACATTACCCTAATGTTGAgcacaaaatattaaaagaagcAAATTGTGGGTCATTATTGGATTATGAATCATTGAAGAATATGAATTTCTTAAAAGCATGTTTATGTGAATCAATGAGATTATATCCACCAGTAGCATGGGATTCAAAGCATGCCACGTGTGATGATATATTGCCAGATGGTACTTTGGTAAAAAGTGGAGATAGAGTGACTTATTTTCCCTATGGAATGGGAAGAATGGAAAATATATGGGGAAAAGATTGGTTTGAATTTAAACCGGACCGATGGTTGGTCGAAACGGTTGAACCAGTTGAACCAGAAAGCAATGAAATAAGAACAATATTGAAAGAAATTTGTCCTTTTAAGTTTCCTATTTTTCAAGCTGGTCCAAGGGTGTGCCTTGGAAAAGAAATGGCTTTTATACAAATGAAATATGTAGTGGCTATTATTATTAGGAGATTTAATATTAAAGTAGTTGGTCCTAATAAGCCTATATTTGTGCCACTTCTTACGGCTCACATGGCCGGCGGATTAAAAGTATTGATTTCTAAGAGAGTGTGA 1551 0.363 MGSFITLLLSFQPLSFIFFLLFYIIFIEYRRIKKYVGFSPTTYPVIGCLISFYKNRFRLLDWYTELLAQSPTNTILVQRLGARRTIVTANQHNVEYILKTNFKNFPKGKPFTEILGDFLGKGIFNVDGDLWMKQRKLVSHEFSLRSINEFFVNTLEEEVNGKLLPFMDSLSIENKVVNFQELLGRFSFNVICKFTLGINDDNGNNRCCLDPFFPISPLARAFDVAAEISARRGAAPLFLVWKVKKWLGVGSEKKLREAVNEVKTRVMKIILEKKKKMNVTGEELDGVQDLLSRLISSGHDEEVIRDMMISFIMAGRDTTSSAMTWFFWLLSHYPNVEHKILKEANCGSLLDYESLKNMNFLKACLCESMRLYPPVAWDSKHATCDDILPDGTLVKSGDRVTYFPYGMGRMENIWGKDWFEFKPDRWLVETVEPVEPESNEIRTILKEICPFKFPIFQAGPRVCLGKEMAFIQMKYVVAIIIRRFNIKVVGPNKPIFVPLLTAHMAGGLKVLISKRV 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00597 516 PANTHER CYTOCHROME P450 14 514 - -
Tsu04g00597 516 Gene3D Cytochrome P450 34 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00597 516 PANTHER CYTOCHROME P450, FAMILY 94, SUBFAMILY B, POLYPEPTIDE 2 14 514 - -
Tsu04g00597 516 SUPERFAMILY Cytochrome P450 39 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00597 516 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00597 516 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00597 516 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00597 516 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00597 516 Pfam Cytochrome P450 40 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00597 516 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00597 516 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00597 516 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00597 516 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00597 516 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00597 Tsu-Chr4 5596300 5598786 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00597 5 515 Cytochrome P450 AT3G48520 55.361 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00597 K20665 - gmx:100786130 714.916