Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00586 ATGGATGTTGAAAATCAGAATCCAGATTCAGAGTTTCCGTTCTGGAAACCAATTCCTCGTAGATTCCAACCCGATTCCCCTTTCTTTGCAATCGGTAACCTCGAACGAGAACTTCTTGTTAAACAGgTTGCTTTGGAATTAActgaagaaaaggaaaaacttgAGGATTTGATACAAGAGGATGGACGGGAAGTCTTCTGTCCCATTGTTGGGTGTGGAGCTCGTTTGGCTTCAATGGAGGACTTTGAAAATCACTATAAAGCAAGACATACTGCATCCTGTTCTGTGTGTTCTAGAGTCTATCCGACATCACGTTTGCTTAGCATTCATGTATCGGAAGCTCATGATTCTTTCTTTCAGGCAAAAGTTGCACGTGGCTATGACATGTATGAATGCTTAGTGGAAGGTTGTGGTTTGAAATTCAAAAGCTACAAAAGTAGGCATCAGCATCTAGTTGACAGGCATAAATTCCCAACATCGTTTGAGTTTTTTAAGAAGGCTCTGCCTTCAAAGAAACACAGGATGAAGTCTCAACGTAAAAAACCTTCTCATAAGGAGGATACTTCAGGAATGATGGAAGTGGAAAATGCAGTCATAGATGACCTTGTTTCAGCAGTCTCTAAATTGAATACTTCGGACTCAACTCCTTCATCTATCAGCTTTGGTCGCCGTAACCCCAAAGGCATGACATTTGTCCCGCGAGCTGTTCAGCGTGGGAAGGGATCAAACTCAGATTCACCCGTTACAAAGAGATAA 756 0.4087 MDVENQNPDSEFPFWKPIPRRFQPDSPFFAIGNLERELLVKQVALELTEEKEKLEDLIQEDGREVFCPIVGCGARLASMEDFENHYKARHTASCSVCSRVYPTSRLLSIHVSEAHDSFFQAKVARGYDMYECLVEGCGLKFKSYKSRHQHLVDRHKFPTSFEFFKKALPSKKHRMKSQRKKPSHKEDTSGMMEVENAVIDDLVSAVSKLNTSDSTPSSISFGRRNPKGMTFVPRAVQRGKGSNSDSPVTKR 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00586 251 MobiDBLite consensus disorder prediction 209 251 - -
Tsu04g00586 251 MobiDBLite consensus disorder prediction 209 224 - -
Tsu04g00586 251 PANTHER UNCHARACTERIZED 9 240 IPR039258 -
Tsu04g00586 251 ProSitePatterns Zinc finger C2H2 type domain signature. 132 155 IPR013087 -
Tsu04g00586 251 PANTHER ZINC FINGER PROTEIN 511 9 240 - -
Tsu04g00586 251 ProSitePatterns Zinc finger C2H2 type domain signature. 67 90 IPR013087 -
Tsu04g00586 251 SMART c2h2final6 130 155 IPR013087 -
Tsu04g00586 251 SMART c2h2final6 92 115 IPR013087 -
Tsu04g00586 251 SMART c2h2final6 65 90 IPR013087 -
Tsu04g00586 251 ProSitePatterns Zinc finger C2H2 type domain signature. 94 115 IPR013087 -
Tsu04g00586 251 MobiDBLite consensus disorder prediction 171 192 - -
Tsu04g00586 251 Coils Coil 40 64 - -
Tsu04g00586 251 MobiDBLite consensus disorder prediction 237 251 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00586 12 246 C2H2 Transcription Factor Family AT5G14140 65.574 5.72e-113 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tsu04g00586 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00586 - - gmx:100819557 401.749