Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00584 atgagTTCCTTAAAAGAGAAACTAAAATCACTATACAAAAGTAGATGGTTTGTTTTTGTTGGAGCAATGTGGTTACAATCATGGGCTGGTATTGGATATTTATTTGGAAGTATATCACCAGTTATAAAGAGATCATTAAATTATAATCAAAAACAACTTGCTATGTTAGGTGTTGCTAAAGACCTTGGTGATTGTGTTGGTTTTGTTACTGGTGTTTTATGTGAGATTTTACCTATTTGGGCTGCTTTACTTGTTGGTGCTTCTTTGAATCTTGTTGGTTATGGTTGGGTTTGGTTAATTGTTACAAGTAAAGTTCCTACTCTTCCTTTATGGGctATGTGTATTCTTATATTTGTGGGAACAAATGGTGAAACCTACTTCAACACAGTTTCACTGGTGTCTTGCGTGCAAAATTTCCCGAAAAGCCGCGGTCCTGTCGTCGGAATTCTAAAGGGCTTTGCTGGATTGAGTGGTGCAATATTGACACAAATATATGCACTCATTCATTCCCCTGATCATGCATCATTGATATTTATGGTTGCAGTTGGTCCATCATTGGTAGCAATAGGTCTTATGTTCATTGTTAGACCTGTCGGAGGCCACAAACAAGTGCATCCGTCAGATGGAAAATCGTTCACATTTGTTTATGGTGTATGCCTCCTTTTGGCGGCTTATTTGTTGGGAGTTATGGTTGTTCAAGATTTAGTTGATCTGAGTGAAACAGTTATctcaatttttactattatcCTCTTTCTGATCCTCCTTGTTCCAATTGTAATTCCTTTGTCGCTGACTTTCGGATCTGCCGAGAAGACTCTAGAGGAAGAAGCGCTTCTTCTAGAACCAGAAGGACAATCACAACAATATTCCGATGAAGTAATATTGAGTGAGTTGGAAGATGAGAAGCCTAAGGAAGTGGACTTGCTTCCGGCATTGGAAAGGCAGAAACGTATAGCGCAATTACAATCGAGACTACTACAAGCTGCTGCAGAAGGAGCTGTTagggttaagaggaggagaggaCCACATAGAGGAGAAGATTTTACCTTGATGCAAGCTTTGATTAAAGCAGATTTTTGGCTTCTTTTCATTTCCATGGTTTTAGGTTCTGGATCTGGGTTGACTGTAATTGACAATCTCGGGCAAATGAGCCAGTCTTTAGGATATGAGAATGCGCATATATTCGTCTCCATGATCAGTATTTGGAACTTTCTTGGACGTGTCGGAGGAGGCTACATATCTGAGATTGTTGTCAAGGATCATACCTATCCAAGACCAGCTGCATTAGCTGTATTTCAACTAGTTATGACTATTGGTCATCTTTCCATCGGTATGGGATGGCCAGGTTCAATGTACATCGGCACTTTACTAGTTGGACTTGGTTATGGTGCTCATTGGGCAGTTGTTCCAGCTACAGCCTCTGAATTATTCGGTTTAAGAAACTTTGGCGCATTATACAATTTCATCACACTAGCAAACCCTATTGGAACCCTTGTTTTCTCCAGTCTCATTGCTAGCCGAATCTATGATCGTGAAGCGGAGAAACAAGCTCATGGCGGCCAACACCTTAATATAGGATCATATGTATCTCACGCGCTTAATGCTAGTGAGCCGCTAAAGTGTGAAGGTTCCATATGTTTCTTCTTGACTTCATCTATCATGGCAGGATTTTGCATTGTTGCAGCAGGCTTAAGCATGTTTCTCGTCTTCCGAACAAGGATTGTTTATGCTAATTTATATGGAAAGTCTTCTATGAGAAACCTTCGATGA 1770 0.3921 MSSLKEKLKSLYKSRWFVFVGAMWLQSWAGIGYLFGSISPVIKRSLNYNQKQLAMLGVAKDLGDCVGFVTGVLCEILPIWAALLVGASLNLVGYGWVWLIVTSKVPTLPLWAMCILIFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYALIHSPDHASLIFMVAVGPSLVAIGLMFIVRPVGGHKQVHPSDGKSFTFVYGVCLLLAAYLLGVMVVQDLVDLSETVISIFTIILFLILLVPIVIPLSLTFGSAEKTLEEEALLLEPEGQSQQYSDEVILSELEDEKPKEVDLLPALERQKRIAQLQSRLLQAAAEGAVRVKRRRGPHRGEDFTLMQALIKADFWLLFISMVLGSGSGLTVIDNLGQMSQSLGYENAHIFVSMISIWNFLGRVGGGYISEIVVKDHTYPRPAALAVFQLVMTIGHLSIGMGWPGSMYIGTLLVGLGYGAHWAVVPATASELFGLRNFGALYNFITLANPIGTLVFSSLIASRIYDREAEKQAHGGQHLNIGSYVSHALNASEPLKCEGSICFFLTSSIMAGFCIVAAGLSMFLVFRTRIVYANLYGKSSMRNLR 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00584 589 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 3 583 - -
Tsu04g00584 589 Pfam Nodulin-like 15 262 IPR010658 -
Tsu04g00584 589 SUPERFAMILY MFS general substrate transporter 213 573 IPR036259 -
Tsu04g00584 589 SUPERFAMILY MFS general substrate transporter 5 197 IPR036259 -
Tsu04g00584 589 CDD MFS_Mch1p_like 14 562 - -
Tsu04g00584 589 Gene3D MFS general substrate transporter like domains 324 515 IPR036259 -
Tsu04g00584 589 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00584 Tsu-Chr4 5417972 5423276 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00584 2 583 Nodulin-like Gene Family AT5G14120 68.591 0.0 808
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00584 - - aprc:113861924 981.859