Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00549 ATGTTAGGTCCCCTTCTCCACCACTCCTTTGACCGCCTCTCTCACAAATATGGACCGTTATTCTCTCTTAACTTTGGTTCCGTTGTTTGCGTCGTAGCTTCCACTCCTCACTTCGCAAAACAAATCCTTCAAATAAACGAACATGCTTTTAATTGTCGTAATGAATCAACCGCCATTAAACGTCTTACATATGAATCTTCTCTAGCATTTGCACCCTACGGCGAATATTGGAGATTTATTAAGAAGCTTAGCATGAACGAACTTTTAGGCTCTCGTAGTATTAATAGCTTCCAACACTTGCGTTTACAAGAGACTTACAATCTATTTAAACTTTTCgttaataaagcaaaaaattatGAGGTTGTGAATGTGACGCAGGAGTTTCTTAAATTGACAAACAACGTCATTTCTAAAATGATGTTGGGGGAAGCTGAGGAGGCTAGGGATGTTGTGCGTGATGTAACCGAGATTTTTGGAGAGTTTAATGTGTTGGATTTTATTTGGTTGTTTAAGAAACTTGATTTACAAGGTTTTGGGAAGAGGATAGAGGATTTGTTTATTAGGTTTGATACTTTGGTGGAAAGAGTTATTTCTAAAAGAGAGGAGATGAGGAAGAACAAAAGAATGGTGGAAAATAAGGGTGGTGAAAAGGGTGCTGAATTTAGAGACTTTCTTGATGTCTTGCTTGATTGTGTTGAGGATGAAAACTCCGAAGTAAAAATTGAAAGGGTTCACATTAAGGCCTTAATTATGGCCATAACACCACTACAAGTCATGACACAACTATGGGCCTCCCTAAGAGAATTATCAAAAGGCCCATCCACTTGGAAGACTATGTCACCAATCTCAAGCCCATTAATGAGAACATCATCTAGAAGCTCTTTTGTCCTTGATGACCGTCGTAGTCTTGTAGAGCTTGCACATGCTATAGCCTTATAA 939 0.3823 MLGPLLHHSFDRLSHKYGPLFSLNFGSVVCVVASTPHFAKQILQINEHAFNCRNESTAIKRLTYESSLAFAPYGEYWRFIKKLSMNELLGSRSINSFQHLRLQETYNLFKLFVNKAKNYEVVNVTQEFLKLTNNVISKMMLGEAEEARDVVRDVTEIFGEFNVLDFIWLFKKLDLQGFGKRIEDLFIRFDTLVERVISKREEMRKNKRMVENKGGEKGAEFRDFLDVLLDCVEDENSEVKIERVHIKALIMAITPLQVMTQLWASLRELSKGPSTWKTMSPISSPLMRTSSRSSFVLDDRRSLVELAHAIAL 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00549 312 PRINTS E-class P450 group I signature 131 149 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00549 312 PRINTS E-class P450 group I signature 14 33 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00549 312 PANTHER CYTOCHROME P450 FAMILY FLAVONE SYNTHASE 2 263 - -
Tsu04g00549 312 Gene3D Cytochrome P450 1 256 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00549 312 SUPERFAMILY Cytochrome P450 3 252 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00549 312 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 2 263 - -
Tsu04g00549 312 Pfam Cytochrome P450 6 252 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00549 312 Coils Coil 193 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00549 Tsu-Chr4 5063957 5066315 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00549 1 277 Cytochrome P450 AT5G06900 37.329 2.34e-50 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00549 - K23179 ag:BAA22423 405.986