Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00548 ATGGTTGCTAGAAGATGTATCAAAGATTGCAACATTGAAAACTATATGATCccaaaaaatagtttaatcttTGTGAATACTTGGTCTATTGGAAGAAATCCAAAATATTGGGACAATCCATTGGAATTTGATCCTGAAagatttttacaaaattcaacAGATTCATATATTGATGTGAGGGGACAAAATTTTTCACTTTTACCATTTGGGTCAGGAGCAAGAATGTGCCCTGGAATTAATTTAACTATGCAATTAGTAGCAGCTTTGCTTGGTGCTATAATTCAATGCTTTGATTTTCATGTTTTGGATTCTAAAGGTGACATTATGAATGGTGGTGATATTGCTATTGATGTGAATGAAAGGCCAGGATTGACTGCTCCTAGGGCTCATGATTTGGTTTGTATTCCTGTTGAAAGGATTGGTTACCGTGGGCCTCTTGAAACCCTTGGATTCATGGATGGAGAACCGCCACGACAACTTGTGTTAGGTCTTCAAGCAACGGGCATTGTTCCGGTTCCAATTCAACCGCCACCAATATCAATCGACACTGAAAGTCATTTTATGACTGAGGTACATGAGGAATCCAAAGAAGCTTTGATCAAATGGGCTCGCAAAGTAGCACAAAAGTTGAAGTTTGCAATTATAATTAGGAGAACGGACAACGGCGGGGATAAAAGTAGAAAGCCGTTTTTTATATGA 699 0.3677 MVARRCIKDCNIENYMIPKNSLIFVNTWSIGRNPKYWDNPLEFDPERFLQNSTDSYIDVRGQNFSLLPFGSGARMCPGINLTMQLVAALLGAIIQCFDFHVLDSKGDIMNGGDIAIDVNERPGLTAPRAHDLVCIPVERIGYRGPLETLGFMDGEPPRQLVLGLQATGIVPVPIQPPPISIDTESHFMTEVHEESKEALIKWARKVAQKLKFAIIIRRTDNGGDKSRKPFFI 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00548 232 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 140 - -
Tsu04g00548 232 SUPERFAMILY Cytochrome P450 2 139 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00548 232 Pfam Cytochrome P450 2 109 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00548 232 PANTHER CYTOCHROME P450 FAMILY FLAVONE SYNTHASE 1 140 - -
Tsu04g00548 232 PRINTS E-class P450 group I signature 76 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00548 232 PRINTS E-class P450 group I signature 26 50 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00548 232 PRINTS E-class P450 group I signature 66 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00548 232 Gene3D Cytochrome P450 1 130 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00548 232 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 69 78 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00548 Tsu-Chr4 5061529 5062942 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00548 4 140 Cytochrome P450 AT4G31940 39.416 1.29e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00548 - K23179 ag:BAA22423 220.705