Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00546 ATGGAACATCAACTATTAGCCTTCATCACATTCCTTCTTTCATCACTCATTTGCTACATAATTTTCCGGCCAATTTTAAACCGTCACAAAAAACTCCCTCCATCTCCGTTATTTAAACTACCGATCATTGGCCACATGCACATGTTAGGTCCCCTTCTCCACCACTCCTTTGACCGCCTCTCTCACAAATATGGACCGTTATTCTCTCTTAACTTTGGTTCCGTTGTTTGCGTCGTGGCTTCCACTCCTCACTTCGCAAAACAAATCCTTCAAATAAACGAACATGCTTTTAATTGTCGTAATGAATCAACTGCGATTAAACGCCTTACATACGAATCTTCTCTAGCATTTGCACCCTATGGCGAATATTGGAGATTTATTAAGAAGCTTAGCATGAACGAACTTTTAGGCTCTCGTAGTATTAATAGCTTCCAACACTTGCGTTTACAAGAGACTCACAATCTATTTAAACTTTTCgttaataaagcaaaaaattatGAGGTTGTGAATGTGACGCAGGAGTTTCTTAAATTGACAAACAACGTCATTTCTAAAATGATGTTGGGGGAAGCTGAGGAGGCTAGGGATGTTGTGCGTGATGTAACCGAGATTTTTGGAGAGTTTAATGTGTCGGATTTTATTTGGTTGTTTAAGAAACTTGATTTACAAGGTTTTGGGAAGAGGATAGAGGATTTGTTTATGAGGTTTGATACTTTGGTGGAAAGAGTTATTTCTAAAAGAGAGGAGATGAGGAAGAACAAAAGAATGGTGGAAAATAAGGGTGGTGAAAAGGGTGCTGAATTTAGAGACTTTCTTGATGTCTTGCTTGATTGTGTTGAGGATGAAAACTCCGAAGTAAAAATTGAAAGGGTTCACATTAAGGCCTTAATTATGGATTTCTTCACAGCAGGAACAGACACAACAGCAATTTCAACAGAATGGGCATTAGTAGAATTAATGAATAATCCTTCATTGCTCAAAAAAGCTCGTGAAGAGATAGACAAAATAGTAGGAAAAAATAGACTAGTGGATGAATCTGACGGTCCAAATCTTCCTTATCTTCAAGCCATAATGAAAGAAACATTTCGTCTCCACCCACCAGTACCTATGGTCACTAGAAGATGTATTACAAATTGCACGATAGAAAACTATATGATCCCAGAAAATAGTTTAATCTTTGTGAACAATTGGTCTATTGGAAGAAATCCAAATTATTGGGATAAACCATTGGAATTTAATCCCGAAAGATTTTTGAATAATTCAACAAATTCTAAAATTGATGTGAGGGGACAAAATTTTCAGATTTTGCCATTTGGGTCAGGAAGAAGGATGTGTCCTGGGGTTACTTTAGCAATGCAAGAAGTGCCAGCTTTACTTGGTGCTATAATTCAGTGCTTTGATTTTCATGTTGTGGATTCTAATGGTGAGATTATGAAGGGTGGTGATATTGTTATTGATGTGAATGAAAGGCCAGGATTGACTGCTCCTAGGGTTCATGATTTGGTTTGTGTTCCTGTTGAAAGAATTGGTTATGGTGGACCTCTTCAAACCCTTGGATGTTGA 1563 0.373 MEHQLLAFITFLLSSLICYIIFRPILNRHKKLPPSPLFKLPIIGHMHMLGPLLHHSFDRLSHKYGPLFSLNFGSVVCVVASTPHFAKQILQINEHAFNCRNESTAIKRLTYESSLAFAPYGEYWRFIKKLSMNELLGSRSINSFQHLRLQETHNLFKLFVNKAKNYEVVNVTQEFLKLTNNVISKMMLGEAEEARDVVRDVTEIFGEFNVSDFIWLFKKLDLQGFGKRIEDLFMRFDTLVERVISKREEMRKNKRMVENKGGEKGAEFRDFLDVLLDCVEDENSEVKIERVHIKALIMDFFTAGTDTTAISTEWALVELMNNPSLLKKAREEIDKIVGKNRLVDESDGPNLPYLQAIMKETFRLHPPVPMVTRRCITNCTIENYMIPENSLIFVNNWSIGRNPNYWDKPLEFNPERFLNNSTNSKIDVRGQNFQILPFGSGRRMCPGVTLAMQEVPALLGAIIQCFDFHVVDSNGEIMKGGDIVIDVNERPGLTAPRVHDLVCVPVERIGYGGPLQTLGC 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00546 520 Coils Coil 240 260 - -
Tsu04g00546 520 PANTHER CYTOCHROME P450 FAMILY FLAVONE SYNTHASE 5 509 - -
Tsu04g00546 520 Gene3D Cytochrome P450 25 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00546 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Tsu04g00546 520 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00546 520 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00546 520 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00546 520 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00546 520 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00546 520 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00546 520 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00546 520 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00546 520 Pfam Cytochrome P450 33 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00546 520 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00546 520 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00546 520 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00546 520 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00546 520 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 509 - -
Tsu04g00546 520 SUPERFAMILY Cytochrome P450 33 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00546 Tsu-Chr4 5029636 5032370 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00546 5 508 Cytochrome P450 AT5G06900 40.541 3.73e-129 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00546 K23179 - ag:BAA22423 810.061