Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00541 ATGGAACATCAACTAttagccttcacattcattcTTTCATCACTCATTTGCTACATAATTTTCCGACCAATTTTAAACCGTCACAAAAACCTCCCTCCATCACCTTTATTTAAACTGCCGATCATTGGCCACATGCACAGTTTAGGTCCCCTTCTCCACCACTCCTTCGACCGCCTCTCTCACAAATACGGACCGTTATTCTCTCTTAACTTTGGTTCCGTTCTTTGTGTCGTCGCTTCCACTCCTCACTTCGCAAAAGAAATCCTTCAAATAAACGAACATGCTTTTAATTGTCGTAATGAATCAACCGCCATTAAACGCCTCACGTACGAATCTTCTCTAGCATTTGCACCCTACGGAGAATATTGGAGATTTATTAAAAAGCTTAGTATGAACGAACTTTTAGGCTCTCGTAGTATTAACAACTTCCGACACTTGCGTTTACAAGAGACTCACAACCTCATTAAACTTTTCgttaaaaaagcaaaaagttATGAGGCTGTGAATGTGACGCAGGAGTTTCTTAAATTGACAAACAACGTCATTTCTAAAATGATGTTGGGGGAAGCTGAGGAAGCTAGGGATGTTGTGCGTGATGTGACCGAAATTTTTGGAGAGTTTAATGTATCGGATTTTATTTGGTTGTTTAAGAAACTTGATTTACAAGGCTTTGGGAAGAGGATAGAGGATTTGTTTATGAGGTTTGATACTTTGGTGGAAAGAGTTATTTCTAAAAGAGAGGAGATGAGGAAGAACAAAAGAATGGTGGACAATAAGGGTGGTGAAGAGGGTGTTGAATTTAGAGACTTTCTTGATGTCTTGCTTGATTGTGTTGAGGATGAAAACTCCGAAGTAAAAATTGAAAGGGTTCACATTAAGGCCTTAATTATGGATTTTTTCACAGCAGGAACAGACACCACAGCAATTTCAACAGAATGGGCATTAGTAGAACTAATGAATAACCCTTCATTGCTCAAAAAAGCTCGTGAAGAGATAGACAAAGTAGTAGGAAAAAATAGACTAGTAGATGAATCTGACGGTCCAAATCTTCCTTATCTTCAAGCCATAATGAAAGAAACATTTCGTCTCCACCCACCAGTACCTATGGTCAATAGAAGATGTATCACAAATTGCAAAATAGAAAACTATATGATCCCAGAAAATAGTTTAATCATTGTAAACAGTTGGTCTATTGGAAGAAATCCAAATTATTGGGACAAACCATTGGAATTTAATCCGGAAAGATTTTTGAATAATTCAACAAATTCTAAAATTGATGTGAGGggacaaaattttcaaattttaccaTTTGGGTCAGGAAGAAGGATGTGTCCCGGTGTTAATTTAGCAATGCAAGAAGTTCCAGCTTTGCTTGGTGCTATAATTCAGTGCTTTGATTTTCATGTTGTGGATTCTAATGGTGAGATTATGAAGGGTGGTGATATTGTTATTGATGTGAATGAACGGCCAGGATTGACTTCTCCTAGGGCTCATGATTTGGTTTGTGTTCCTATTGAAAGGATTGGTTATGGTGGACCTCTTCAAATCCTTGGATGTTGA 1560 0.3667 MEHQLLAFTFILSSLICYIIFRPILNRHKNLPPSPLFKLPIIGHMHSLGPLLHHSFDRLSHKYGPLFSLNFGSVLCVVASTPHFAKEILQINEHAFNCRNESTAIKRLTYESSLAFAPYGEYWRFIKKLSMNELLGSRSINNFRHLRLQETHNLIKLFVKKAKSYEAVNVTQEFLKLTNNVISKMMLGEAEEARDVVRDVTEIFGEFNVSDFIWLFKKLDLQGFGKRIEDLFMRFDTLVERVISKREEMRKNKRMVDNKGGEEGVEFRDFLDVLLDCVEDENSEVKIERVHIKALIMDFFTAGTDTTAISTEWALVELMNNPSLLKKAREEIDKVVGKNRLVDESDGPNLPYLQAIMKETFRLHPPVPMVNRRCITNCKIENYMIPENSLIIVNSWSIGRNPNYWDKPLEFNPERFLNNSTNSKIDVRGQNFQILPFGSGRRMCPGVNLAMQEVPALLGAIIQCFDFHVVDSNGEIMKGGDIVIDVNERPGLTSPRAHDLVCVPIERIGYGGPLQILGC 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00541 519 PANTHER CYTOCHROME P450 FAMILY FLAVONE SYNTHASE 4 508 - -
Tsu04g00541 519 Pfam Cytochrome P450 32 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00541 519 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00541 519 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00541 519 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00541 519 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00541 519 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00541 519 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00541 519 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00541 519 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00541 519 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00541 519 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00541 519 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00541 519 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00541 519 Gene3D Cytochrome P450 24 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00541 519 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 508 - -
Tsu04g00541 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Tsu04g00541 519 SUPERFAMILY Cytochrome P450 32 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00541 Tsu-Chr4 4993579 4995549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00541 9 507 Cytochrome P450 AT5G06900 41.326 1.08e-130 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00541 - K23179 ag:BAA22423 820.846