Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00538 ATGGTCTCCCTTGCGACTTCTCTCAACATGTTGTCCCCAAGGCACAAGACACTAATTGTCATATCATTCATCCAGTCTTTTCCACAAGTGTTATATACGCTGACATATGTATTTCTCCCTTCAACACTTCAACACACATTTGTTCGATTAGAATTGCCCTCATATTTACCTTCAACAACTCAAATTTGTTACTCGGTAAACGTCTCAATATCTCACTTCGAACTCATGCTTTTGATTATACGGTTTGCATATCAGAGTCTTGGTGTAGTTTATGGAGATTTGGGAACTTCACCATTATATGTTTTCTATAACACATTTCCTCATGGAGTTGATGATCCGGAGAAAGTAATTGGAGCTCTTTCTTTAATCATATACTCTCTTACTTTTGTGCCTCTgctcaaatatgtttttattgtaTTAAGAGCAAATGACAATGGTCaagGTGGAACGCTAGCTCTTTATTCCTTGCTTTGCCGACATGCAAATATAAAAATCATACCGAACCAACATCATACAGATGAAGAGTTGACGACATATAGCCGGACGACCTCTCTTGAGAAGTCATTTGCTGCAAAAACTCAAAGATGGATAGAGGGACgtacatttattaaaaaaatcattcttgTTGTTGTCCTTGTTGGTACATGTATGGTGATTGGAGACGGTATTCTTACCCCAGCTATATCTGGTATGCCTTATTCTTTAAACAATTTTATCTCCTTTGTTACAGATGTAGTTGTGATTGTTGCTGTTGTAATATTAGTTGGACTATTCAGCATGCAACATTATGGTACAAATAGGGTTGGTATGCTCTTTGCTCCAATTGTTCTGCTTTGGTTTCTCTTAATAGGAGGTATAGGTATATACAACATCACGAGATTTGGTGGCAGTGTCCTAAAAGCCTTTTCACCTATGCACATGTATCAATATCTAAGAAACGGAGGCAAAGATAATTGGCTTTCCCTTGGTGGAATTTTGCTTAGCATAACAGGGACAGAAGCTCTTTTTGCCGACTTAGCAAATTTTCCAGTCTCATCGGTACAAATTGCATTTACTCTTGTTGTGTTTCCTTGCCTTCTTTTATCATATTCTGGACAGGCTGCTTATTTGGTGAATAACTTGCATCATTCACAAGATGTTTTTTATCGTTGTATTCCAGACAAAATATATTGGCCAGTATTTGTTATTGCAACACTGGCAGCAATAATTGCAAGCCAAGCCACAATAACTGCAACCTTTTCAATCATTAAACAAGCTCATGCTCATGGATGTTTCCCAAGAGTCAAAGTTGTACATACATCGAAAACGTTTGCTGGTCAGATATATATTCCGGATATCAATTGGATCCTTATGGTTCTTTGCATTGCTGTTACTGTCGGATTTAGAAATGAAAGCCAAATTGGAAATGCTTATGGCACTGCAGTTGTGTTAGTCATGTTGTTTACAACATTGCTGATGACTTTGGTCATGATAATAGTTTGGCAGTGTCATTGGATTCTTGTTGTTTTGTTCACCGGCTTATCATTGATTGTCGAATGTACATACTTCTCTGTTATACTCTTCAAAATTGATCAAGGTGGATGGGTTCCCCTTGCAATTGCTGGAGTATTTCTAACTGTTATGTATGTTTGGCATTACGGTATGGTGAAGCGCTACGAGTTTGAATTACATAGCAAAGTCTCAATGGCATGGCTTCTCAATCTCGGTCCCAGTTTAGGACTAGTTCGTGTCCCTGGAATCGGTTTAGTCTATACAGAGCTCGCAAGTGGAGTTCCCCACATATTTTCTCATTTCATTACAAACCTACCAGCCATCCATTCTGTTGTTGTTTTCGTCTGTGTGAAATATCTTCCTGTCTACACTGTCCCAGAAGGAGAACGGTTCCTTATCAGGCGTGTCGGACCAAATAATTTCCACATTTTTCGGTGTGTAGCGCGATATGGATATAAAGACCTGCATAAGAAAGACGATGATTTCGAGAAGAAGCTCTTTGACAACCTTTTCATGTCTGTTCGACTCGAGATGATGATGGAATGTTCCTCAGATTCGGAATACAGTTTATGTGAACCGCAAATTGAAGTGAATAATAACAATGGAAACACAACTTCATCGAGTAATGTGGATTTGTCAATTTCATCAGTAGATTCGACACTTCATTCAAGATCACCATCTTATTTGAATATTATTGTTCAATCTTCTAGTCATTGTACTGAGGTTGATGAACTTGAATTTTTAAACAAGTGTAGAGAAGCTGGTGTTGTTCATATACTTGGAAACACAATTGTGAGGGCAAGTAGTGGTTCAAGTTTCTACAAGAAAATAGCCATTGATTATATATATGCGTTTCTTAGGAAAATATGCAGGGAAAATAGTATGTTCTTAAATATTCCTCATGAGAGTCTCTTAAATGTTGGTCAAGTTTTTTATGTATAa 2433 0.3711 MVSLATSLNMLSPRHKTLIVISFIQSFPQVLYTLTYVFLPSTLQHTFVRLELPSYLPSTTQICYSVNVSISHFELMLLIIRFAYQSLGVVYGDLGTSPLYVFYNTFPHGVDDPEKVIGALSLIIYSLTFVPLLKYVFIVLRANDNGQGGTLALYSLLCRHANIKIIPNQHHTDEELTTYSRTTSLEKSFAAKTQRWIEGRTFIKKIILVVVLVGTCMVIGDGILTPAISGMPYSLNNFISFVTDVVVIVAVVILVGLFSMQHYGTNRVGMLFAPIVLLWFLLIGGIGIYNITRFGGSVLKAFSPMHMYQYLRNGGKDNWLSLGGILLSITGTEALFADLANFPVSSVQIAFTLVVFPCLLLSYSGQAAYLVNNLHHSQDVFYRCIPDKIYWPVFVIATLAAIIASQATITATFSIIKQAHAHGCFPRVKVVHTSKTFAGQIYIPDINWILMVLCIAVTVGFRNESQIGNAYGTAVVLVMLFTTLLMTLVMIIVWQCHWILVVLFTGLSLIVECTYFSVILFKIDQGGWVPLAIAGVFLTVMYVWHYGMVKRYEFELHSKVSMAWLLNLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEGERFLIRRVGPNNFHIFRCVARYGYKDLHKKDDDFEKKLFDNLFMSVRLEMMMECSSDSEYSLCEPQIEVNNNNGNTTSSSNVDLSISSVDSTLHSRSPSYLNIIVQSSSHCTEVDELEFLNKCREAGVVHILGNTIVRASSGSSFYKKIAIDYIYAFLRKICRENSMFLNIPHESLLNVGQVFYV 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00538 810 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 75 809 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tsu04g00538 810 PANTHER POTASSIUM TRANSPORTER 75 809 - -
Tsu04g00538 810 TIGRFAM kup: potassium uptake protein 83 810 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tsu04g00538 810 Pfam K+ potassium transporter 84 651 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00538 Tsu-Chr4 4965209 4972409 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00538 88 810 Inorganic Solute Cotransporters AT2G35060 70.919 0.0 1050
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00538 K03549 - gmx:100801093 1102.04