Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00520 ATGGATAAAAATTCCACCGCCGGAGAACAACAACCACCGTCGGAAAATGAAACggaggaagagaagaaaaaagaaaccatAGAAACCGCTGAATCTCCTCCTCGTAACCTTGACAAGATTTCAAACGACATTGATCAATTTCTTGTTGCGAATGAGAATGTTGATGGAGTTTCGATTGAAATTCCTGGTTATGTAGAAAAGTTTTTGGATCTTGTGACGGATAATTTAGCGAAATGTGGAACGGAAAGTAAAGTGAAATGGGAAGAGATTCTCGAGAAAGATTCATGGTTGCTTGAATCTGTGAATCGAATTACGAAGCTTAAGAAAATTCTGACTCATCATGatcatgaaaatgaaaaaagagaTTCGATATCGAATCGAATTGGTGTAATTCAACAGAAAGCGATGTCGTTTTTGGAAGAAGATTTTCGGTTGTTGATAGAAGATTCTAGAATTCCAACGAATTTGAATCCACAGAAGGAAGGTGAATCTAGTGATCAGGTAGAATCCGATAAGAATTTTCCGGGTTATACGGACGAGGTGATTGCTTGTATGAGCAAGATTGCCGGCGAGATGTTGAACGGCGGATATGAATCGGAGATTTGTCAGGTGTACATTGTGGTGCGAAGGACGGCTTTTGAGGAGATTCAACAACAGCTAGGATTGGAAAGAATTAGCATTGATGATATGGTTCAAAAGGTTCAATGGGAGATTCTAGCAAGAGACATGATTCCGGCATGGACAAACACGTTTCGTCAATGCACCGGGGTATATTTCCCCGGTGAAAAGAAATTAGCTGAGGCGGTTTTCTCAAGTCATCTGAATGTTGCGGAGGGTTTGTTTAGCAGTCTCTCCCGCGGAGTTGTGATTCCTCTTCTCAACTTCGCGGAAGGGGCTGCCATGACAAAACGTGCTGGAGAGAAGCTATTCAAATTGCTTGACATGTACGAAACTCTTAGGGATATTATACCGAAGTTGGATGGACTCTTTCCAGAAGAGTCCTCAGAAGAGTTAAAGACAGAGATAGACCTTGCCAAGGCACGCCTTGGCGAGACAATTATCTCTATCTTTTGTGACTtggaaaatcaaatcaaatcagaACCTGCAAAGAATCCGGTCCCCGGTGGCGCGGTTCATCCTCTCACACGCTACATAATGAATTACCTTAACATAGCTGGTGATTACAAAGAAACACTTGAACAAGTTTTCAAGGAACATTCAAAGATCCAACACAGCGAAAACATTATTAAGGAAGCGTCGTCACCATTTGCGGCACAGGTAATGAGAGTCATGGAATTACTCGACGATAGCCTCGATGGTAAAGCAAAATTGTACCGCGACGTTTCATTAAGCAACTTCTTCATGATGAACAATGGTAGatacattttacaaaaaatcaaaGGGTCAACTGAATTGAGCCAATTGATGGGTGAAACATGGTGTAGAAGGAAATCTTCTGAATTAAGAAACTACCACAAAACCTACCAAAGAGAAACATGGAATAAAGTGCTAACATGTCTGAGTCATGAAGGGTTGAATGTAAATGGAAAGGTGCAAAAACCAGTACTCAAAGAGAGGTTCAAAAGCTTCAATTCAATGTTTGATGAGATTCATAAGACACAAAGTTCATGGGTTGTGAAGGATGAACAACTTCAATCAGAGCTTCGAGTTTCCATATCGGCCGTGGTGATTCCGGCGTATAGGGCATTTGTTGGGAGGTTTTCACAGAATTTATCTGCTGGAAGACAGACTGAGAAGTATATAAAGTATCAACCTGAGGATATAGAAACTTACATTGATGAGTTGTTTGATGGAAAACCTCATCAATCTATTGGTAAAAGGAAAACATAA 1851 0.3917 MDKNSTAGEQQPPSENETEEEKKKETIETAESPPRNLDKISNDIDQFLVANENVDGVSIEIPGYVEKFLDLVTDNLAKCGTESKVKWEEILEKDSWLLESVNRITKLKKILTHHDHENEKRDSISNRIGVIQQKAMSFLEEDFRLLIEDSRIPTNLNPQKEGESSDQVESDKNFPGYTDEVIACMSKIAGEMLNGGYESEICQVYIVVRRTAFEEIQQQLGLERISIDDMVQKVQWEILARDMIPAWTNTFRQCTGVYFPGEKKLAEAVFSSHLNVAEGLFSSLSRGVVIPLLNFAEGAAMTKRAGEKLFKLLDMYETLRDIIPKLDGLFPEESSEELKTEIDLAKARLGETIISIFCDLENQIKSEPAKNPVPGGAVHPLTRYIMNYLNIAGDYKETLEQVFKEHSKIQHSENIIKEASSPFAAQVMRVMELLDDSLDGKAKLYRDVSLSNFFMMNNGRYILQKIKGSTELSQLMGETWCRRKSSELRNYHKTYQRETWNKVLTCLSHEGLNVNGKVQKPVLKERFKSFNSMFDEIHKTQSSWVVKDEQLQSELRVSISAVVIPAYRAFVGRFSQNLSAGRQTEKYIKYQPEDIETYIDELFDGKPHQSIGKRKT 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00520 616 Pfam Exo70 exocyst complex subunit 247 601 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tsu04g00520 616 PANTHER EXOCYST COMPLEX PROTEIN EXO70 28 611 IPR004140 GO:0000145|GO:0006887
Tsu04g00520 616 SUPERFAMILY Cullin repeat-like 98 604 IPR016159 -
Tsu04g00520 616 MobiDBLite consensus disorder prediction 154 174 - -
Tsu04g00520 616 MobiDBLite consensus disorder prediction 1 38 - -
Tsu04g00520 616 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 28 611 - -
Tsu04g00520 616 Gene3D Exocyst complex component Exo70 80 612 - -
Tsu04g00520 616 MobiDBLite consensus disorder prediction 15 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00520 Tsu-Chr4 4849174 4851024 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00520 9 616 EXO70 exocyst subunit family AT5G13990 48.855 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00520 K07195 - gmx:100820172 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g00520 04 4849174 4851024 Tsu06g02570 06 33162536 33164668 PCT