Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00505 ATGGCCAGAAAATATGAGGGACCTGCAATTGGAATTGAACTTGGCACTAACAACTCACGTGTTGCGGTGTGGCAGGAAATAGTCAACCGAACGGAGATAATGCACAATGAACAAGGATACAGAACCACTCCTTCTTTTGTTGCATTTACTGATGACAGAATGTTGATTGGTGATGCTGCCAAATCTCAGGCTGCCTCTAATCCATTCAACACTATCTTTGATGCAACCGAGTTGATTGGAAGGAAATATAGTGATCCCATAATTCAGAATAATCTACGGTTGTGGCCCTTTAAAGTCATTTCTAGTATGACTGACAAACCTGTGATACTTGTAAAGTACAAGAATGAAGAAAAGCGTTTTTTTGCAGAGGAAATATCATCTATGGTCCTCAAAAAGATGCGGGAGATTGCCGAGAAATGTTTGGAGTCATCTGTAAAAAATGCAGTGATTACGGTTCCTGCTTATTACAACTATTCTCAGCGAAAAGCCACAAAAGATGCTGGTGTTCTTGCTGGCATCAATGTAATGCAGATAATCAATGAACCTATTGCTGCTGCTCTTGCATATAGTCTTAATAGAAGAACCAATTGtgttaaaaatagaaatattttaatctttgatctTGGTAGTAGAACTTTTGATGCGTCACTCATCACACTCAAGGATGAGAAGTTTGAAATAAAGGCGATGGCGGAGACTAACTTTGGAGGAGATGACCTTGATCAGAGAATGATAAAGCATTTTGTGAAGGAGTTCAAGAGGAAGCATAAGAAGGATATTAGTGGGAACTCAAGGGCCCTTAGAAGGTTGACAACTGAGTGCGAGAGGGCAAAAAGGACACTTTCATATGACACTGAGGTCACAATTGACATAGATGCTATATGTGAGGGTATTGACTTCTGTTCATCAATTACTCGGGCCAAGTTTGAGCAACTAAACATGGACCTCTTTGAAAAGTGTATTGAGACCGTTGAAAGTTGTCTTACTGATGCTAACATGTACAAGAGTAGTGTCGATGTAGTTGTTCTTGTTGGTGGATCTTCTAAGATTCCCAAAGTGCATAATCTTTTGAGTGATTTTTTCGGAAACGATATTATTGTTAACAATCTTGCTGAGGCTGTTGCGTGTGGTGCAGCTATCCTAGCTGCTTTGTTAAGTGGACACCTTAAGGTTCCAAAGGATGTGCATCAATATCTTACAAGGTTGTCTCTTGCAGAACCAGTACAAGAAATATTGAATGATAAAAAAGTTCATGTTACAATTGAAGATAACAAATCTAATGTGTTGATTGATTTTCAAGAGGGTGTTGGAATGACTGTTAATGTTGCTGGTTCGTTTAATATATCAGTTCCTGATATTCCTTGA 1365 0.3832 MARKYEGPAIGIELGTNNSRVAVWQEIVNRTEIMHNEQGYRTTPSFVAFTDDRMLIGDAAKSQAASNPFNTIFDATELIGRKYSDPIIQNNLRLWPFKVISSMTDKPVILVKYKNEEKRFFAEEISSMVLKKMREIAEKCLESSVKNAVITVPAYYNYSQRKATKDAGVLAGINVMQIINEPIAAALAYSLNRRTNCVKNRNILIFDLGSRTFDASLITLKDEKFEIKAMAETNFGGDDLDQRMIKHFVKEFKRKHKKDISGNSRALRRLTTECERAKRTLSYDTEVTIDIDAICEGIDFCSSITRAKFEQLNMDLFEKCIETVESCLTDANMYKSSVDVVVLVGGSSKIPKVHNLLSDFFGNDIIVNNLAEAVACGAAILAALLSGHLKVPKDVHQYLTRLSLAEPVQEILNDKKVHVTIEDNKSNVLIDFQEGVGMTVNVAGSFNISVPDIP 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00505 454 Gene3D - 73 128 - -
Tsu04g00505 454 PRINTS 70kDa heat shock protein signature 211 221 - -
Tsu04g00505 454 PRINTS 70kDa heat shock protein signature 338 354 - -
Tsu04g00505 454 PRINTS 70kDa heat shock protein signature 60 68 - -
Tsu04g00505 454 PRINTS 70kDa heat shock protein signature 8 21 - -
Tsu04g00505 454 PRINTS 70kDa heat shock protein signature 148 168 - -
Tsu04g00505 454 PRINTS 70kDa heat shock protein signature 38 50 - -
Tsu04g00505 454 PRINTS 70kDa heat shock protein signature 368 388 - -
Tsu04g00505 454 Pfam Hsp70 protein 9 405 IPR013126 GO:0005524|GO:0140662
Tsu04g00505 454 PANTHER HEAT SHOCK PROTEIN 70KDA 4 449 IPR013126 GO:0005524|GO:0140662
Tsu04g00505 454 Gene3D Actin; Chain A, domain 4 236 319 - -
Tsu04g00505 454 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 449 - -
Tsu04g00505 454 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
Tsu04g00505 454 Gene3D - 10 383 - -
Tsu04g00505 454 Gene3D - 194 367 - -
Tsu04g00505 454 SUPERFAMILY Actin-like ATPase domain 199 385 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00505 Tsu-Chr4 4741624 4743183 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00505 1 454 Calmodulin-binding Proteins AT3G12580 56.933 7.62e-175 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00505 K03283 - gmx:102667578 496.508