Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00497 ATGGCGAGAAAATACGAAGGATATGCTGTGGGAATAGACCTTGGAACAACCTATTCATGTGTTGGTGTTTGGTTGGAGGACAAAAACAGAGTTGAGATAATCCACAACGATGAAGGCAACAAAATCACACCTTCTTTTGTTGCTTTTACTGATGATCAAAGGTTGGTCGGTGGTGCTGCTAAGGATCAAGCTGCCATCAATCCACAAAACACTGTCTTGGATGCTAAGAGATTAATTGGTAGAAAGTTTAGTGATCCAGTTGTTCAAACGGATATCATGTTGTGGCCATTCAAAGTTATTTCTGGTTTTAATTACAAACCTATGCTTACCGTTAAGTACAAGGGACAGGAGAAGCATCTATGTGCTGAGGAAATCTCATCTATCGTCCTCACAAATATGAAGCAGATTGCAGAGGCATATTTAGAATCACCAATTAAAAACGCAGTTGTCACTGTGCTTGCATATTTCATCTATTGTCAGCGAAAAGCTACCATGGATGCTGGTGCCATTGCTGGCCTTAATGTTATGAGGATAATAAACGAACCCACTGCTGCAGCTGTTGCATATGGTCTTGACAAAAGAGGTCATCTCTTTGAAGTTAAAGCCACCTCCGGAAACACTCATCTTGGTGGAGAGGATTTTGATAATAGAATGTTGAACAACTTTGTTGAAGAAATTATGAGGAAGAACAAAGTGGATATTACTAGGAACCCAAGAGCCTTGAGGAGGTTGAGAACTGCATGTGAAAAGGCAAAAAGGACactttctttcaaattggtcaCCACTATTGAGATTGATTATTTATGTGAGGACATTGATTTCTCTTCATCAATCAATCGTGTCAAGTTTGAGGAAATCAATATGGATCTTTTTAATGAGTGTATTAAGACTGTTGAGAGTTGTCTTACTGATTCAAAGATGGAAAAAAGTAGTGTAGATGATATTGTTCTTGTCGGTGGCTCATCTAGGATTCCCAAAGTGAATGGTAAGGATCTGTGCAAGAGCATCAACCCCGATGAGGCTGTTGCTTATGGTGCAGCTGTCCAGGCTGCTGTGTTGAGTGAAGGCATTAAGAATGTTCCAAACTTGGTGCTGCGAGATGTTACCCCTTTATCACttggtatattttttaatggagATATCACGAGTCCGGTGATTCCTAGGAATACCTTTGTACCTGTCAAGAAGACACAAATTTATACTACAACATTTGATAACCAAACCTCAACCCTAATTCAGGTTTATGAGGGTGAAAGAGCAAGAACAACTGACAACAATCTTCTTGGTTTTTTTAATCTTTCTTGTATTCAAGGTGCTCCTCATGGCCATCCCTTGGAGGTATGCTTTGCTATTGACGAAAATGGACCTGCTATTGGAATAGACCTTGGCACAAGCTATTCATGTGTTGCTGTATGGCAAGAAGAAAACAATAGAGCAGAGATAATCCACAATGAACAAGGAAAGAGAATAACACCTTCTTTTGTTGCTTTCACTAGTGATCAAAGGTTGATTGGTGATGCTGCTAAAAATCAAGCTGCTTCAAATCCAGCCAACACTATCTTTGATGCAAAGAGGTTGATAGGAAGGAAATTTAGTGATTCTGTTATTCAAAATTATTTACAGTTGTGGACCTTTAAGGTCATTGCTGGAAAAGATGACAACCCTACGattgttgttaattttaagAATGAGGAAAAGCACTTTGTTGCAGAAGAAATTTCAGCAATGGCCACTGCCGGTGACACTCATCTCGGAGGAGAGGACTTTGATCACAGAATGGTAAATCACTTTGTGAAGGAGTTCAAAAGAAAGCATAAGAAGGACATCAGTGGGAACCCGAGGGATTTAAGGAGGTTAAGAACTGCTTCTGAGAAGGCAACGAGGATACTTTCATTTGATGCTGAGGTCACAATTGACATAGATGTCATATATGATGGTATTGATTTCCATTCATCTGTCACTCGGGAAAAGTTGGAGAAACTCAATGCGGACCTTTTTAAAATGTGTATGGAGATTGTTGAAAGTTGCCTTAATGATGCTATGATGGACATCAGTACTGTAGATGATGTTGTACTTGTTGGGGGATCTTCAAGAATTCCAAAAGTGCAACAGTTATTGCAGGAATTTTTCAAGGGAAAGAATTTGTGCATGAGCAACAACCCTGATGAAGCTGTTGCTTATGGTGCGGCTGTCCAGGCTGCTTTGCTGATTGAGGGCATTAAAAATGTTCCAAACTTGATCTTGCAAGATGTTATACCATTGTCTATTGGTATATTTGTAAAAGGTGATATCATGGATGTCGTAATTCCTAGGAACACTACCATTCCTGTCACAAAGAAGAGTTTTATCAAGGTTTATGAGGGTGAGAGAATGATATCCAGTGAAAACAACTTGCTCGGTTTTTTTAGGCTCTCAATTCCTCTTTCTCCTCGTGGACTTCCTATCAAAGTATGCTTTGATATAGATTTAAATGGTATATTAAACGTCTCTGCAGAGGAAGAAAGCAGTGGTAATAAGAAAGATATTACAATAACGAATGAAAATGGAAGACTATCAAGTGAAGAAATTGATAGAATGATCGGGGAAGCTGAAAATTTTAAGGATCAAGACATGAAGTTCAAGAAGAAAGTTCAAGCAATGAATGCTTTGGATGATTATCTTTACAACATGAGGAATGTAATGAAGGATGATTGTGTTAGTTCCATGCTTGCCTCAATAGACAAAATGAAGATCAACTCTGCAATGATAAAGGGAAAAGGTTTGATTGATGACAAACAACACCAAGAAACTTTTGTGTTTGTTGACTTTCTGAGAGAACTTGAGAGCATATTTGAATCTGCTTTGGTCAAAGTCAACAAAGGTTACTCAGATGAGGAAAGTGATTCTGACTCTTAA 2895 0.3813 MARKYEGYAVGIDLGTTYSCVGVWLEDKNRVEIIHNDEGNKITPSFVAFTDDQRLVGGAAKDQAAINPQNTVLDAKRLIGRKFSDPVVQTDIMLWPFKVISGFNYKPMLTVKYKGQEKHLCAEEISSIVLTNMKQIAEAYLESPIKNAVVTVLAYFIYCQRKATMDAGAIAGLNVMRIINEPTAAAVAYGLDKRGHLFEVKATSGNTHLGGEDFDNRMLNNFVEEIMRKNKVDITRNPRALRRLRTACEKAKRTLSFKLVTTIEIDYLCEDIDFSSSINRVKFEEINMDLFNECIKTVESCLTDSKMEKSSVDDIVLVGGSSRIPKVNGKDLCKSINPDEAVAYGAAVQAAVLSEGIKNVPNLVLRDVTPLSLGIFFNGDITSPVIPRNTFVPVKKTQIYTTTFDNQTSTLIQVYEGERARTTDNNLLGFFNLSCIQGAPHGHPLEVCFAIDENGPAIGIDLGTSYSCVAVWQEENNRAEIIHNEQGKRITPSFVAFTSDQRLIGDAAKNQAASNPANTIFDAKRLIGRKFSDSVIQNYLQLWTFKVIAGKDDNPTIVVNFKNEEKHFVAEEISAMATAGDTHLGGEDFDHRMVNHFVKEFKRKHKKDISGNPRDLRRLRTASEKATRILSFDAEVTIDIDVIYDGIDFHSSVTREKLEKLNADLFKMCMEIVESCLNDAMMDISTVDDVVLVGGSSRIPKVQQLLQEFFKGKNLCMSNNPDEAVAYGAAVQAALLIEGIKNVPNLILQDVIPLSIGIFVKGDIMDVVIPRNTTIPVTKKSFIKVYEGERMISSENNLLGFFRLSIPLSPRGLPIKVCFDIDLNGILNVSAEEESSGNKKDITITNENGRLSSEEIDRMIGEAENFKDQDMKFKKKVQAMNALDDYLYNMRNVMKDDCVSSMLASIDKMKINSAMIKGKGLIDDKQHQETFVFVDFLRELESIFESALVKVNKGYSDEESDSDS 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00497 964 Gene3D Actin; Chain A, domain 4 214 292 - -
Tsu04g00497 964 Gene3D Actin; Chain A, domain 4 585 668 - -
Tsu04g00497 964 PANTHER HEAT SHOCK PROTEIN 70KDA 196 455 IPR013126 GO:0005524|GO:0140662
Tsu04g00497 964 SUPERFAMILY Actin-like ATPase domain 187 353 IPR043129 -
Tsu04g00497 964 PANTHER HEAT SHOCK PROTEIN 70KDA 577 952 IPR013126 GO:0005524|GO:0140662
Tsu04g00497 964 PANTHER HEAT SHOCK PROTEIN 70KDA 455 576 IPR013126 GO:0005524|GO:0140662
Tsu04g00497 964 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 879 954 IPR029048 -
Tsu04g00497 964 ProSitePatterns Heat shock hsp70 proteins family signature 1. 460 467 IPR018181 -
Tsu04g00497 964 Gene3D - 454 579 - -
Tsu04g00497 964 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Tsu04g00497 964 PANTHER HEAT SHOCK PROTEIN 70KDA 4 195 IPR013126 GO:0005524|GO:0140662
Tsu04g00497 964 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 741 879 IPR029047 -
Tsu04g00497 964 PANTHER HEAT SHOCK 70 KDA PROTEIN 577 952 - -
Tsu04g00497 964 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 195 - -
Tsu04g00497 964 PANTHER HEAT SHOCK 70 KDA PROTEIN 455 576 - -
Tsu04g00497 964 Gene3D - 191 336 - -
Tsu04g00497 964 PANTHER HEAT SHOCK 70 KDA PROTEIN 196 455 - -
Tsu04g00497 964 PRINTS 70kDa heat shock protein signature 8 21 - -
Tsu04g00497 964 PRINTS 70kDa heat shock protein signature 312 328 - -
Tsu04g00497 964 PRINTS 70kDa heat shock protein signature 362 381 - -
Tsu04g00497 964 PRINTS 70kDa heat shock protein signature 148 168 - -
Tsu04g00497 964 PRINTS 70kDa heat shock protein signature 442 458 - -
Tsu04g00497 964 PRINTS 70kDa heat shock protein signature 60 68 - -
Tsu04g00497 964 PRINTS 70kDa heat shock protein signature 38 50 - -
Tsu04g00497 964 Gene3D - 7 363 - -
Tsu04g00497 964 SUPERFAMILY Actin-like ATPase domain 456 576 IPR043129 -
Tsu04g00497 964 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 742 884 IPR029047 -
Tsu04g00497 964 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 364 453 IPR029047 -
Tsu04g00497 964 SUPERFAMILY Actin-like ATPase domain 7 193 IPR043129 -
Tsu04g00497 964 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 363 455 IPR029047 -
Tsu04g00497 964 Pfam Hsp70 protein 9 455 IPR013126 GO:0005524|GO:0140662
Tsu04g00497 964 Pfam Hsp70 protein 457 576 IPR013126 GO:0005524|GO:0140662
Tsu04g00497 964 Pfam Hsp70 protein 577 926 IPR013126 GO:0005524|GO:0140662
Tsu04g00497 964 Gene3D - 880 964 IPR029048 -
Tsu04g00497 964 SUPERFAMILY Actin-like ATPase domain 574 736 IPR043129 -
Tsu04g00497 964 ProSitePatterns Heat shock hsp70 proteins family signature 3. 690 704 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00497 Tsu-Chr4 4711083 4716042 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00497 577 954 Calmodulin-binding Proteins AT3G12580 58.524 4.79e-147 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00497 K03283 - gmx:102667578 642.499