Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00493 ATGAGTGTATTGATTCCTAGAAATTCTACCATTCCTGTGAAGATGAAAAAAGTATACCACACATGTGAAGATGACCAACCTGGTGTCTCGATCGATGTCTACGAGGGTGAGAGAATGGTTGCAACCGAGAACAACTTGCTTGGTTTATTTGAACTCCAAATTCCTCTTGCGCCACGCCACCTTCCTATCCAAGTTTGTTTTGCTATAGATGCCGATGGAATATTAACCGTCTCTGCAGAGGAAGAAACTAGCGGCAGTAAGAAAGATATTACGATTACAAAAGAAAATGGTATACTATCAActgaagaaattgaaagaatgGTTCAAGAAGctgaaaaattcaaagaagaaGACATTAAGTTCAAGAAGAAAGTTAAAGCCATGAATGTTTTGGATGATTACCTCTATAACATGAGGAAGGTTATGAAAGATGGTAGTGTTGCTTCCATGCTTAGCTCAACagataaaatgaaaatcaatgCTGCCATGATTAAAGGAAAGAATTTGATTGATGACAAAGAGCATCAAGAAACATTTGTGTTTGTGGACTTTCTGAAAGAGCTTGAAAGCATTTTTGAATCTGCTTTGAGGAAGAGCAACAAAGGTTACTCTGACGAGGAAAGTGATTCTGATTGA 636 0.3506 MSVLIPRNSTIPVKMKKVYHTCEDDQPGVSIDVYEGERMVATENNLLGLFELQIPLAPRHLPIQVCFAIDADGILTVSAEEETSGSKKDITITKENGILSTEEIERMVQEAEKFKEEDIKFKKKVKAMNVLDDYLYNMRKVMKDGSVASMLSSTDKMKINAAMIKGKNLIDDKEHQETFVFVDFLKELESIFESALRKSNKGYSDEESDSD 211
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00493 211 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 200 - -
Tsu04g00493 211 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 127 199 IPR029048 -
Tsu04g00493 211 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 97 IPR029047 -
Tsu04g00493 211 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 1 131 IPR029047 -
Tsu04g00493 211 Pfam Hsp70 protein 2 178 IPR013126 GO:0005524|GO:0140662
Tsu04g00493 211 PANTHER HEAT SHOCK PROTEIN 70KDA 1 200 IPR013126 GO:0005524|GO:0140662
Tsu04g00493 211 Gene3D - 99 202 IPR029048 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tsu04g00493 Tsu-Chr4 4682845 4683480 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00493 1 202 Calmodulin-binding Proteins AT3G12580 52.941 9.48e-61 199
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00493 K03283 - lja:Lj0g3v0151879.1 234.187