Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00492 atgtcaaaaaaattcaatggtCCAGCCATTGGAATTGACCTCGGAACAACATATTCATGTGTAGCAGTTTGGCAGAGCCAAAACAATCGTGCAGAGATTATTCACAATGAACAAGGAAACAGAACCACTCCTTCTTTTGTTGCTTTTACTGATGATCAGAGATTGATTGATGATGCTGCTAAGAATCAAGCTGCTTCTAATCCTGCTAACACTGTCTTtg 220 0.3636 MSKKFNGPAIGIDLGTTYSCVAVWQSQNNRAEIIHNEQGNRTTPSFVAFTDDQRLIDDAAKNQAASNPANTVF 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00492 73 PRINTS 70kDa heat shock protein signature 38 50 - -
Tsu04g00492 73 PRINTS 70kDa heat shock protein signature 60 68 - -
Tsu04g00492 73 PRINTS 70kDa heat shock protein signature 8 21 - -
Tsu04g00492 73 Pfam Hsp70 protein 9 73 IPR013126 GO:0005524|GO:0140662
Tsu04g00492 73 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 73 - -
Tsu04g00492 73 SUPERFAMILY Actin-like ATPase domain 8 73 IPR043129 -
Tsu04g00492 73 PANTHER HEAT SHOCK PROTEIN 70KDA 4 73 IPR013126 GO:0005524|GO:0140662
Tsu04g00492 73 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Tsu04g00492 73 Gene3D - 1 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00492 Tsu-Chr4 4680013 4680232 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00492 1 73 Calmodulin-binding Proteins AT5G02490 73.973 4.41e-32 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00492 K03283 - lja:Lj0g3v0174969.1 131.339