Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00490 ATGTTAGCAGAATTGATCTCAATTCCTCCAGCTCCTCGAGGACATATTCCTGTTAAAGTAACTTTACCTGTAGATCTTGACGGAATTTTAAATGTCTCTGCGAAGGAAGAAACTGGTGGAAATAAGCAAGAAATTACAATAACAAATGAAGAGGGAAAGCTATCAACCAATGATGTGCAGAGAATGATTCAAGAAGCCGAGTTCTTCAAAGCAGAAGACATGAAGCATAAAGCAATGAATGCTTTGGATGATAGTGTTAGTTCCATGCTTACCTCAATAGACAAAATGAAGATCAACTCTGCAATTTGTGTTTGTGGACTTTCTGAAAGAGCTTGA 336 0.375 MLAELISIPPAPRGHIPVKVTLPVDLDGILNVSAKEETGGNKQEITITNEEGKLSTNDVQRMIQEAEFFKAEDMKHKAMNALDDSVSSMLTSIDKMKINSAICVCGLSERA 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00490 111 PANTHER HEAT SHOCK 70 KDA PROTEIN 5 104 - -
Tsu04g00490 111 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 5 80 IPR029047 -
Tsu04g00490 111 Pfam Hsp70 protein 5 95 IPR013126 GO:0005524|GO:0140662
Tsu04g00490 111 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 3 100 IPR029047 -
Tsu04g00490 111 PANTHER HEAT SHOCK PROTEIN 70KDA 5 104 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00490 Tsu-Chr4 4674480 4675142 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00490 4 102 Calmodulin-binding Proteins AT3G12580 46.087 2.32e-24 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00490 K03283 - gmx:102667578 103.219