Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00484 ATGAAGACAAAAGAGTATGTCACATATTTTGATAACCAATCCAATATTTTGGTTGATGTTTATGAGGGTGAGAGAATCATAGCCAAAGATAACAACTTGCTCGGTTCATTTAATTTCCCAGTTCCTCGTGCTCCTCAAGGTCATATTCCTATCAAAGTATGTTTTGCTATAGATGCCGATGGTATATTAAACGTCTCTGCGGAGGAAGAAACCAGTGGTAATAAGAAAGATATTacaataacaaaagaaaatggtaGACTATCAGCTGAAGAAATTGATAGAATGATTCATGAAGCTGAGAATTTCAAAGCTGAAGATATGAAACTTGATCAGAAAGCTAAAACAATGAATGATTTGAACGATTATCTTTACCATGTGAAGAAATTAATTGCTGATAATGATGTCAGTTCTTTGATTTCCCCAGTTGACAAGTTGAAGATCTATACTGCAGTTGTGAAGGGCCAAAAGTTGTTGGATGGCAACAACAATGAAGAAACAAATGTGTTTGTGGATTTTTTGAAGGAGTTTCAGAACATGGTTGATTCTGCTTTGTACAAGATCACCAAAGGAGTTTGA 576 0.3403 MKTKEYVTYFDNQSNILVDVYEGERIIAKDNNLLGSFNFPVPRAPQGHIPIKVCFAIDADGILNVSAEEETSGNKKDITITKENGRLSAEEIDRMIHEAENFKAEDMKLDQKAKTMNDLNDYLYHVKKLIADNDVSSLISPVDKLKIYTAVVKGQKLLDGNNNEETNVFVDFLKEFQNMVDSALYKITKGV 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00484 191 PANTHER HEAT SHOCK PROTEIN 70KDA 2 187 IPR013126 GO:0005524|GO:0140662
Tsu04g00484 191 Gene3D - 116 189 IPR029048 -
Tsu04g00484 191 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 115 IPR029047 -
Tsu04g00484 191 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 2 117 IPR029047 -
Tsu04g00484 191 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 116 189 IPR029048 -
Tsu04g00484 191 Pfam Hsp70 protein 3 182 IPR013126 GO:0005524|GO:0140662
Tsu04g00484 191 PANTHER HEAT SHOCK 70 KDA PROTEIN 2 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00484 Tsu-Chr4 4621277 4621852 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00484 6 191 Calmodulin-binding Proteins AT3G12580 44.920 2.11e-47 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00484 K03283 - lja:Lj0g3v0151879.1 189.504