Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00459 ATGGCTTCTACAAATGAGTACAAAGCAAGTGAGCTCTTTCAAGCTCAAGCTAATTTGTACAATCAAATTTTCAGCTTCATGAGACCCATGTCCATAAAATGGGCCGTCGAACTCGGCATACCGGATATCATCCACAATCACGGCCAGCCGATTACTCTTCCTGAGCTTGTCGCGGCTCTTCGAATTCCCGAATCGAAAGCCACTTGTGTTCATAGCATTATGCGTTTATTAGCACACAATAAAATCTTCACAATTGTGAACATAGATGATAACAAAGAAGCATATGCTCTTGCTCCAACATCAAAGCTTCTTGTTAAAGGCACTAATCATTGTTTATCATCAATGGTTCATTTGATAACTGATCCAAACATTGTTGATTTATATTATCAATTGAGTGAATGGACTTCCAATGAGAAGCTCACAATCCATGAGACTACATTTTGGGATTACTATCATCAAAATCCCAATCATTTGAAGTCTTTCAATGAGGCTATGGAAAGTGATTCTCACATGGTGAGATTGGCAATAAATGATTGCAAATTTGTTTTTGATGGCTTGACTTCATTAGTTGATGTTGGAGGTGGAACCGGAAATACGGCTAAAATTATTTCTGAGGCGTTTCCTATGTTAAAATGTATAGTGTTTGATCTTCCAAAGGTTGTAGAAGGTTTAACGGATAATAACCACTTGAGTTTTGTAGGCGGAAATATGTTTGAATCTATTCCTCAAGCTGATGCAATTTTACTAAAGTGGATTTTGCATGATTGGAATGATGATGACTGTGTGAAGATACTTAAAATTTCTAAAGAAGCtgttttaaagaaaaacaaaggagGAAAAGTGATTATAATAGATATTGTGATTAATAAAGAGCAAGATGAGCATGAAGTGACAGAAGTTAAACTCTTCTTTGACATAAGTATGATGGCTAGTCATAATGCAAGAGAAAGAGATGAAAAAACATGGAACAAAATAATCACAGAAGCTGGATTCACGTGTTACAAAATATTTCCTATATTTGGTTTTAGATCCCTTATTGAactttatgtttaa 1053 0.3447 MASTNEYKASELFQAQANLYNQIFSFMRPMSIKWAVELGIPDIIHNHGQPITLPELVAALRIPESKATCVHSIMRLLAHNKIFTIVNIDDNKEAYALAPTSKLLVKGTNHCLSSMVHLITDPNIVDLYYQLSEWTSNEKLTIHETTFWDYYHQNPNHLKSFNEAMESDSHMVRLAINDCKFVFDGLTSLVDVGGGTGNTAKIISEAFPMLKCIVFDLPKVVEGLTDNNHLSFVGGNMFESIPQADAILLKWILHDWNDDDCVKILKISKEAVLKKNKGGKVIIIDIVINKEQDEHEVTEVKLFFDISMMASHNARERDEKTWNKIITEAGFTCYKIFPIFGFRSLIELYV 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00459 350 PIRSF O-mtase 1 350 IPR016461 GO:0008168
Tsu04g00459 350 Pfam O-methyltransferase domain 130 331 IPR001077 GO:0008171
Tsu04g00459 350 SUPERFAMILY "Winged helix" DNA-binding domain 10 108 IPR036390 -
Tsu04g00459 350 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 350 IPR016461 GO:0008168
Tsu04g00459 350 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 3 349 - -
Tsu04g00459 350 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 348 IPR029063 -
Tsu04g00459 350 Gene3D - 1 104 IPR036388 -
Tsu04g00459 350 Gene3D Vaccinia Virus protein VP39 105 349 IPR029063 -
Tsu04g00459 350 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Tsu04g00459 350 PANTHER O-METHYLTRANSFERASE 3 349 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00459 Tsu-Chr4 4334858 4336181 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00459 29 348 Monolignol Biosynthesis Gene Families AT5G54160 33.033 1.38e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00459 K22588 K13262 gmx:100818947 388.652