Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu04g00434 | ATGGTGGGTAACGACGATGCTCGAGCTCCATGCCACCTTTCAAATTCCCGGAAAATGTTTTGGCGTTCTGCTTCGTGGTCTTCCGCTCGTTCCTCCGCCGCAAACCCTTCCGGAGAATCGGAATCGAATTTCTCAGATCCCAATTCCGGTGTTGAGAATACCAATCGGAGATTCCCTCCACCGCCGTTGACGCCTAGGTCGCAGCAAAATTGTAAGGCACGGTCGTCGTGTTTGCCGCCTCTTCAGCCGCTTTCGATTGCTCGCCGGAGTTTGGATGAGTGGCCGAAAGCGAGTTCCGACGATATTGGGGAGTGGCCACAACCACCTATTACTCCTGGTGGCAGAGGTAATGGTAGTAGCAATAGTAGTAATAGTAATAACAATGGTGAAAGATTGAAACTTGATTTATCTACAATTCAGCAGAATAATAATCCTGATAGTAGGAATAATGGTGGACTTGTGAAGAGAGATAAGATTGCTTTTTTTGATAAGGAATGTTCTAAAGTTGCTGAACATGTTTATCTTGGTGGTGATGCTGTTGCTAAAGATAGggaaattttgaaaagaaatggGATTACTCATGTTTTGAATTGTGTAGGTTTTGTGTGTCCTGAGTATTTCAAAGCTGATTTTGTGTATAGGACTTTGTGGCTACAAGATAGTCCTAGTGAGGATATTACTAGTATTTTGTATGAtgtgtttgattattttgaggATGTTAGGGAAAAGAATGGGAGGGTGTTTGTTCATTGTTGTCAAGGGGTGTCTAGGTCGACGTCTCTTGTTATTGCTTACCTTATGTGGAGAGAAGGGCAGAGTTTCGATGATGCTTTTCAGTTTGTGAAGGCGGCAAGAGGTATTGCTGATCCGAATATGGGTTTTGCTTGTCAGTTATTGCAGTGTCAGAAAAGGGTTCATGCATTTCCTCTTAGTCCTAGCTCTTTGTTGAGAATGTATAGGATTGCTCCTCACTCGCCGTATGATCCTTTGCATCTTGTTCCGAAGATGTTGACGGATCCATCTTCGTCTGCTTTGGACTCTAGGGGTGCTTTTATTGTGCATATTCCTTCGGCGatatatgtttggattggtAAGAAATGTGAAGCTATCATGGAAAGGGATGCTAGAGGGGCTGCGGGTCAGATTGTCCGGTATGAGAGAGTGCAAGGATCGGTTATCATGATTAAGGAAGGTGACGAACCATCTTCTTTTTGGGATGCTTTTTCGAAGTTTTTGCCTTTGATGGAAATGAGTGGTGGCAGTAAAGTAGAAAGTAGCAAATCAAGTGTTAAATATTTTCCTGGTGATAGGAAAGTTGATGCATATGATGTGGATTTTGAAGTTTTTGGAAAAGCCATTGTGGGAGGTTTTGTGCCTCCATTTGCATCATCGGAGAATGAACATGAAACCCATCTTCCTGCAAGAGTGAGTAGTTGGAGTGTTTTAAGGTGGAAAGGTTCCTCTCCTAATGTGAAGGAATTTGTCTCAGCCCCTAAGTTATCCCTCCCGCGGGTTTATTCAGATTCCATGTTGTGTATTCATACATCACAAATTCAACAATTTCCATCACCCTCAATGtcgtcaacatcatcaactttatcatcatcatcctcttcaCCCCCTTTTGTCTCTCCAGATTCCGTTTCTTCTGATTCTAGCACTCACTCAAAGTTTTTGTTAGATTTGTCCCCAGATTCCTCCTCTCTAGTTTCTCCAGTATCTTCATCTTTGTCTAGCTTCTCTAATTTGTCCCTCTCGTCAAATTCTACTTCTCAACCAGCGTCCAAGTGTACAGATATCGATGGTGTCAAGTTATCACATCCATGTTCTCAGTCTGCCTCCTTACCATTGAAAAAACCATCAACTTCCATTGCTGAACGCAGAGGTAATTTATCCAAGTCTTTGAAGTTGCCACCTCTAACGAATAATAACACAAAAGTAATAGATAAACCATCAACTATTCGTTCCAGTCGGGAACATGGTGTTCTTGCTAACAACATCTTTAGCTGTGTGCAAGATTCAGACAGTATTGATTATTTGTTTGATTCTACCAACCATGTCAAAGGTACAAATTCAGTTCAACAGTGTGAGGTGGCATCACGTCCAGGCATTGTTGATAGTGCAGGCTGCAAGGAATCATCATTTCTCAGGAACTGTGTTGAGCCTTCGGGAGATAGTTTGTCAAGAGTAGATTTGAACTCTACCTCATCAAAGGGAGCTAATGAGAGTGGCTCGTTGCAATGTAGTAAGACACAAACTTTAGTATATCGCTGGCCCAGTTTAGAAAAGATCGAGATTTTCGGTGCAAATCATTTGGGCTCGGAGGCTGCTTTTGTCATATTCTCTCCAAGCATACATATGCATACAggaaacattttttatatttgggtAGGGAGTTCTTTCAAACTGGATGCTTCACAGGCTCAGTTAGATAGTGATAGACAGTCTGATTTTCTTGGAGCAGTTGACTGGAACCGAATTGGTTGTGATCTCCTTGCTCAGTTTGATTTACCGAAGAATACAGTCACTAAGATTGTTAAAGAGAATGAAGAACCGCAAGAGTTCCTTGCTTTGCTGAGTTCATTGTAG | 2589 | 0.4059 | MVGNDDARAPCHLSNSRKMFWRSASWSSARSSAANPSGESESNFSDPNSGVENTNRRFPPPPLTPRSQQNCKARSSCLPPLQPLSIARRSLDEWPKASSDDIGEWPQPPITPGGRGNGSSNSSNSNNNGERLKLDLSTIQQNNNPDSRNNGGLVKRDKIAFFDKECSKVAEHVYLGGDAVAKDREILKRNGITHVLNCVGFVCPEYFKADFVYRTLWLQDSPSEDITSILYDVFDYFEDVREKNGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQFVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRIAPHSPYDPLHLVPKMLTDPSSSALDSRGAFIVHIPSAIYVWIGKKCEAIMERDARGAAGQIVRYERVQGSVIMIKEGDEPSSFWDAFSKFLPLMEMSGGSKVESSKSSVKYFPGDRKVDAYDVDFEVFGKAIVGGFVPPFASSENEHETHLPARVSSWSVLRWKGSSPNVKEFVSAPKLSLPRVYSDSMLCIHTSQIQQFPSPSMSSTSSTLSSSSSSPPFVSPDSVSSDSSTHSKFLLDLSPDSSSLVSPVSSSLSSFSNLSLSSNSTSQPASKCTDIDGVKLSHPCSQSASLPLKKPSTSIAERRGNLSKSLKLPPLTNNNTKVIDKPSTIRSSREHGVLANNIFSCVQDSDSIDYLFDSTNHVKGTNSVQQCEVASRPGIVDSAGCKESSFLRNCVEPSGDSLSRVDLNSTSSKGANESGSLQCSKTQTLVYRWPSLEKIEIFGANHLGSEAAFVIFSPSIHMHTGNIFYIWVGSSFKLDASQAQLDSDRQSDFLGAVDWNRIGCDLLAQFDLPKNTVTKIVKENEEPQEFLALLSSL | 862 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu04g00434 | 862 | MobiDBLite | consensus disorder prediction | 21 | 55 | - | - | |
| Tsu04g00434 | 862 | MobiDBLite | consensus disorder prediction | 92 | 130 | - | - | |
| Tsu04g00434 | 862 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 165 | 307 | IPR020422 | GO:0006470|GO:0008138 | |
| Tsu04g00434 | 862 | PANTHER | PROTEIN-TYROSINE-PHOSPHATASE MKP1 | 1 | 856 | - | - | |
| Tsu04g00434 | 862 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 249 | 259 | IPR016130 | GO:0016311|GO:0016791 | |
| Tsu04g00434 | 862 | SMART | dsp_5 | 165 | 304 | IPR020422 | GO:0006470|GO:0008138 | |
| Tsu04g00434 | 862 | MobiDBLite | consensus disorder prediction | 722 | 744 | - | - | |
| Tsu04g00434 | 862 | MobiDBLite | consensus disorder prediction | 113 | 130 | - | - | |
| Tsu04g00434 | 862 | MobiDBLite | consensus disorder prediction | 727 | 744 | - | - | |
| Tsu04g00434 | 862 | Gene3D | Protein tyrosine phosphatase superfamily | 139 | 307 | IPR029021 | - |
Showing 1 to 10 of 20 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu04g00434 | - | - | mtr:MTR_7g023250 | 1339.71 |
Showing 1 to 1 of 1 entries