Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00426 ATGGAGTCGAAAAACGAAACATCGAGcgtaattttaaaattaatggGACTTGATAAAGTTCCTTCTCAACATCATCCTGTTAGAAATAGACCGAAAGTGTTATCCGAGGATTACCTGCAGAAAGTTGCTTCTATTGGTCTTAGAAAGAAGGGTTTGTCTCATCAGCGTCGCTCTTATGGAACGAGTACCGGTCAAAAGGAAGAATCCAACGATGTTTTGAAAGTGGTTAAAACGAATAACGAGTCGCAAATTGTTGTGCATGGAGAAGCAGGATTGTATGAAATATTGAGGCTTTCGAAATCTGAATTGGATCCAAAGGATTTAACTTTCGACTCAAGAATTGTAGTTTCGAAAGTGAACCGTGGAAATGAAGGAAATGGTGAGACTAAAAGGAACATTAGATGTAAGTTTGGTTTCGGTTATAGCTTTGCCAGAAAAGTGCCAACGACAAAACCTTTCTCTGATAATGGTGGAACTATGACTAAGGATGACTTGTTTCAGAAATATTGGGGTTTGAGTAAGAATTCATCTGAAAATTGGTCGAACCAAAATTCAAAGAATCGAAATATCAATCAGAAGGATTGTTCAGAAGATATGAACCTAAAGGCTAGCAGTGAGAAATTGCCATCTTTTTCCGCATATTTCAATAGTAATGATAATAACGATACCGAGAATTGTACTGACCTGCATAAGTTGAAGAAGAGATGTTACGGGagtgattttttcaaaaaggaACATACGCTTTCTCCATTGTCAAGCTCTGACATTCAGATCTTGCAGCAGACATGCTTAATGAATGAAGACGTGAAGAACGATAAGCATGAAGAGAGTAGCATGTGCAAGAACGTTTCCATGTCTCTTGATTCCTCAATTGATATCTTGGTGTCTGAATCGAAAATTAATGTTGTTGGTTGCTACAATAATAATCCAACCATGGAGCAATCTGAATCAACGGTGTCTGTAATAATGTGCGGGGACAGTGATTCTTCAAGCCATGCTTCAAAGCAACAGGAGACGTCAGAATTTCAAGAAGATTCTGTTCATTCACTCTGCACCGAGACTGACACAGATTCTCTTGGTAACTTCCAGGGGGCATATGAAACTAGTCCAATTTCAGTTTTGGATTCCACATTTGACGAAGATATTTCAGTAATCTCCGAATGCGGTGGTGCTGGTGTATATGATTCCTCAGAAGTGGATGACGAAGGACTTGATTTGAATGTTTCAAGCGATGAAGATAGTGACAATGAATCAGTACTTGATTTTGACGAGAAGAAAGATATAGTAGGGTTATCTAGAACAGAAGAAAGTAGGGACTTCTCCTATGTTGTCGAGGTCTTAACCGAGGCAGGTATATCTAACTTGTTCAAAGATTTTTCCACATGGCATTCTGCAGAATGTCCTATAAGCCCTTCTGTCTTCGAAACCCTAGAAAAGAAATTTGGCGAGCAGCAACTTTGGAAAAGATCCGAAAGACGGCTTCTCTTTGATCGTATTAATTTTGGGCTGTTAGATATTCTCCATCCTTCTTTATTTATTCCAATGTCAGAAAAGCCTGTGTCGAGAAGAATGAACATTGAACCAAGCCAGAACATGATTGAGGATGAGATGTGGGGGTTGCTTATTTCGCAAGAAAAGAAAGCCGGTAAGGAGTCAGTAGACAATATGCTTGGGGGGGAAATTAGGTGGATAGAGCTAAGTGAAGATGTCGAAGATATTGTTAGAGAGATAGTTAAGTTGTTAATAGAGGATCTTGTAGATGATATTAGTTAG 1773 0.383 MESKNETSSVILKLMGLDKVPSQHHPVRNRPKVLSEDYLQKVASIGLRKKGLSHQRRSYGTSTGQKEESNDVLKVVKTNNESQIVVHGEAGLYEILRLSKSELDPKDLTFDSRIVVSKVNRGNEGNGETKRNIRCKFGFGYSFARKVPTTKPFSDNGGTMTKDDLFQKYWGLSKNSSENWSNQNSKNRNINQKDCSEDMNLKASSEKLPSFSAYFNSNDNNDTENCTDLHKLKKRCYGSDFFKKEHTLSPLSSSDIQILQQTCLMNEDVKNDKHEESSMCKNVSMSLDSSIDILVSESKINVVGCYNNNPTMEQSESTVSVIMCGDSDSSSHASKQQETSEFQEDSVHSLCTETDTDSLGNFQGAYETSPISVLDSTFDEDISVISECGGAGVYDSSEVDDEGLDLNVSSDEDSDNESVLDFDEKKDIVGLSRTEESRDFSYVVEVLTEAGISNLFKDFSTWHSAECPISPSVFETLEKKFGEQQLWKRSERRLLFDRINFGLLDILHPSLFIPMSEKPVSRRMNIEPSQNMIEDEMWGLLISQEKKAGKESVDNMLGGEIRWIELSEDVEDIVREIVKLLIEDLVDDIS 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00426 590 PANTHER AFADIN 115 589 - -
Tsu04g00426 590 PANTHER AFADIN 1 94 - -
Tsu04g00426 590 Pfam Domain of unknown function (DUF4378) 439 588 IPR025486 -
Tsu04g00426 590 MobiDBLite consensus disorder prediction 326 348 - -
Tsu04g00426 590 PANTHER DUF4378 DOMAIN PROTEIN 1 94 - -
Tsu04g00426 590 PANTHER DUF4378 DOMAIN PROTEIN 115 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00426 Tsu-Chr4 4024502 4028919 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00426 351 589 TRM (TON1 Recruiting Motif) Superfamily AT2G39435 30.385 2.09e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00426 - - cam:101499857 678.707