Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00411 ATGTTCTGTTCTTTCGCCTTTATTCTCTTCCATTTCGATTCACCTTCATCTGCTCTCTCTaatcttcaagtttcaacaaGCATCATCTCTCTAAACATTGCTCAACCTGTTCAGAGGTTTGAATCGGGAACAATGGCTGGGAAAGTGGCGAAGGCAGCTTATGATGCGAAAATGGGGAAGCTTCTTCGAGAGTACACACAAGTTTTGGTTGTTTCGGCAGACAATGTTGGGTCAAACCAGCTTCAGGGTATAAGGAGGGCACTGCATGAAGATTCAGTGGTAGTGATGGGGAAGAACTCGTTGATGAAACGCTCTATTATGCAGGAAGCGGAGAAAACTGGAAACAACAACGCTTTCCTTAATCTTGTTCCTCTCCTTGTTGGGAATGTTGCATTGATTTTTACAAAAGGTGACTTGAGGGATGTTAGCGAAAAGATTGCCAAGCTCAAAGTTGTTAATCCTATTCTCATGTGCCCTAAGTACAGGTCATATGACTCATACAAAACTTGTTCCTATATGCAATCCGGACAACTGCCATTGGGCCTCACATGTTGTAACCAACAATCTTCAGAAGCTTCCGAGCCTTTTCTTGTAAGCTCCAAATTCTCGCCACCCCAGCACTGTTACTTGATGAGATCGAGACAATTCATGTTGACAAGTATATGGTCTCCTTTTCTCCTTTTGGCTGGTAATTTGTGA 699 0.4206 MFCSFAFILFHFDSPSSALSNLQVSTSIISLNIAQPVQRFESGTMAGKVAKAAYDAKMGKLLREYTQVLVVSADNVGSNQLQGIRRALHEDSVVVMGKNSLMKRSIMQEAEKTGNNNAFLNLVPLLVGNVALIFTKGDLRDVSEKIAKLKVVNPILMCPKYRSYDSYKTCSYMQSGQLPLGLTCCNQQSSEASEPFLVSSKFSPPQHCYLMRSRQFMLTSIWSPFLLLAGNL 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00411 232 Gene3D - 47 165 IPR043141 -
Tsu04g00411 232 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 45 231 - -
Tsu04g00411 232 PANTHER RIBOSOMAL PROTEIN L10P-RELATED 45 231 - -
Tsu04g00411 232 SUPERFAMILY Ribosomal protein L10-like 51 150 IPR043141 -
Tsu04g00411 232 Pfam Ribosomal protein L10 50 149 IPR001790 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00411 Tsu-Chr4 3914785 3916882 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00411 45 195 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 49.091 5.91e-39 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00411 K02941 - jre:108980032 145.591