Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00370 ATGTTTCCTTCTACTTATTGCTCTTTAGGTCCTTACCCTTGTTATAATCctaattcttcttcttcatcacatTCATACCCTCCTTTTACTTTTCTTACCCCTGATCAAAATGTTTCTTCAAACAACCCcaccaacaacaataacaacaacaacaacaacatgaaCACTTATCTTCATGATCCAACTATTTCTATTCCCTACACACAAAcaactcatcatcatcatgttcCAATTAATCCTGAAACACTAACAAATTGGGCTGTTGCTGATTACGCCGCAATGTTGAAACAAGATCTAAGTGGTTCTTCTCATTATGGTAATCTCTCAAATTTGCTTACAAAGAAACCGGTTAAGAAACCGGTGAAGAAAGACCGGCACAGCAAGATTCATACATCTCAAGGTTTGAGAGATAGAAGGGTAAGACTTTCTATTGAGATAGCGCGAAAGTTCTTCGATCTTCAAGACATGTTAGGGTTTGACAAAGCTAGTAACACACTTGAATGGCTCTTCAACAAATCAAAAGAAGCAATTGAAGAGTTAACAAGAAGCAAAAACAACATAGGTTCgggtggtgatgatgatgacgatgatcGTAGCTTATATTCTTCGTCTTCTGATGAAGGAGACGAAGAAGTAAGAAAGATGAAAAGGGCACAAAAAGAATCTTCAAAGATGAAAGATTCAAGGGAAAAATCAAGAGCAAGAGCAAGTGAAAGAACAAGtgaaatgatgatgatgcaagatttgaaagaaaaataccCTGAAAATGTTCAAAATCAACAAATCCTTCATCAATTGATGCCTAATGATGAAGAAAGTTCAAAATCACTTCAAAGAGAtgatatttttaactttattgaGGAATCAATAGTTATTAAGAGAAAGTTGAAGAAATCTTCtcaccatcatcaacaacaaaacaatttgATCCCTAAGGAAACAAGTTTTGATCCCAACAATGAGTGTCATGACTCTCCAATGTTATCACCAAATTGGGATACTAATAGTAACAATTCTGCTTCTGGAAGATCCAACTTTTCTGCAATATCAAGAATGAATCTATCATCAGggCTTCAAATCTTTGGAAAATCATGGGAGGATTGCAATACAAGTCCAAATCGATATTAG 1128 0.2961 MFPSTYCSLGPYPCYNPNSSSSSHSYPPFTFLTPDQNVSSNNPTNNNNNNNNNMNTYLHDPTISIPYTQTTHHHHVPINPETLTNWAVADYAAMLKQDLSGSSHYGNLSNLLTKKPVKKPVKKDRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFNKSKEAIEELTRSKNNIGSGGDDDDDDRSLYSSSSDEGDEEVRKMKRAQKESSKMKDSREKSRARASERTSEMMMMQDLKEKYPENVQNQQILHQLMPNDEESSKSLQRDDIFNFIEESIVIKRKLKKSSHHHQQQNNLIPKETSFDPNNECHDSPMLSPNWDTNSNNSASGRSNFSAISRMNLSSGLQIFGKSWEDCNTSPNRY 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00370 375 MobiDBLite consensus disorder prediction 188 243 - -
Tsu04g00370 375 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 29 375 - -
Tsu04g00370 375 MobiDBLite consensus disorder prediction 297 340 - -
Tsu04g00370 375 ProSiteProfiles TCP domain profile. 122 180 IPR017887 -
Tsu04g00370 375 MobiDBLite consensus disorder prediction 182 243 - -
Tsu04g00370 375 Pfam TCP family transcription factor 121 246 IPR017887 -
Tsu04g00370 375 ProSiteProfiles R domain profile. 226 243 IPR017888 -
Tsu04g00370 375 MobiDBLite consensus disorder prediction 26 54 - -
Tsu04g00370 375 MobiDBLite consensus disorder prediction 303 340 - -
Tsu04g00370 375 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 29 375 IPR005333 GO:0003700
Tsu04g00370 375 Coils Coil 215 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00370 Tsu-Chr4 3460063 3461753 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00370 115 244 TCP Transcription Factor Family AT1G67260 49.677 3.61e-36 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Tsu04g00370 TCP 6.7e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00370 - - cam:101489716 426.787