Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00361 ATGGCTTCAATCACTCTTTCTCCAAATGCTTCCCCTATTGCATTGCCTCCATCATCTGGTGCTGCTGTTTTgtcaccaccaccatcacctAATACTTCTCAATCCAATCAATCTTCTAATTCGCCACAGGCCGTGCCTGTAACTTCTCCTCCTTCTCCGTCTCCTCCGCAGACTGTTCCTGTAACTTCTCCTCCTTCTCCTTCCATTTCTCCTCCTCCACCGTCGAATGCACCACCGCCAACATCACCACCATCACCTCCTGCATCACCACCTCCTGCACCAGTAGTAACTGCCCCTCCTCCAGCTAAAACTTCACCTTCTGTTCCAAATTTGTCTCCACCACCTCCATCAGCAGATTCCCCTCCTCCTCAATCATCAAAGCCACCTCCTTCTCAATCAATTTCGCCGTCTCCTCCTCCACCTCCTCCAGCCAATGTACCAAAGCCACCGTCTTCCGATCCTCCTCCTGCACCACAAGCAAAGCCACCAAAAAGTAACACTCCTTCACCTCCTGCACCACAAGCAAAACCACCCAAAAGTAACACTCCTTCACCACCTGCACCACAAGCAAAGCCACCAAAAAGTAACACTCCTTCACCTCCTTCACATGATGCATCTCCTCCATCGGTTTCTCAATCTCCTCCTTCCCCTTCCACCGGCGATCCTCCATCCGCTTCGACTGTTGTTCCACCTCCATCTACATTGCCGTCAACTCCTCCTTCAGTCCCTTCAGGATCTGCAGCACCTCCAGCAACTTCTTTGCTTCTTCCTCCTACAAACGAAACAGTACCTGCTGGCGGTCCAAAAGTGTCAATGCCATCTATTCCAACTGAGAAACCAACTGCTAGACCAACTGTTGATGGCTCTGGTAATATAGGCACGAGCAACACGCCTTCACATTCAGGAGGGTTAACGACCGGAGGAGCTGTTGCTATTGGCGTCGTAGCTAGTTTAATTGTTCTCAGCCTTCTTGGTATGGCTGTGTGGTTTGTACAGAAAAAGAAGAAGCGAAAAGGACCAAGAGATGATTCTGCCGCACCTTCCCCATTTACCTCGTCTCACAATTCAGGTACATTGTTCTTGAAGCCACAGTCTCAAGCTAATTTTGTAGGGAGTGGCAGCGGTAATGAATATGTGTATTCACCATCAGAGCCAGGTGGAGTAAATAGTTCAAGATCATGGTTCACATATGAAGAACTTATCCAAGCTACAAATGGATTTTCAGAGCAGAATAAATTGGGAGAAGGTGGATTTGGTTGTGTCTACAAAGGTTTGCTCACAGATGGAAGAGAAGTAGCTGTGAAACAGCTTAAAATTGGTGGTGGGCAAGGGGAACGTGAATTCAGAGCAGAAGTTGAGACTATTAGTCGAGTACATCATCGTCATCTGGTTTCTTTGGTTGGTTACTGTATATCTGAGCATCAAAGATTGCTTGTCTATGACTATGTTCCCAACAATACTCTTCATTACCATCTACATGATGATAAAGCACCCGTTCTGGACTGGTCTATCAGAGTTAGGGTTGCTGCTGGCGCAGCTCGTGGAATAGCTTACCTACATGAAGATTGCCATCCACGCATTATTCATCGAGATATTAAATCATCAAACATCCTTCTCGATCACAACTTTGAAGCTCTTGTTTCAGATTTTGGTCTTGCGAAATTAGCGTTGGATTCAAACACACATGTAACTACACGTGTAATGGGAACCTTTGGGTACATGGCACCAGAATATGCGACAAGTGGGAAATTGACTGATAAGTCTGATGTATATTCCTTCGGTGTTGTACTGTTGGAGCTAATTACAGGTCGAAAGCCCGTAGATGACTCTCAGCCAATTGGTGATGAGAGCCTGGTTGAATGGGCTCGTCCTCTGTTGATTGAAGCACTTGATAATGAGGACTTTGAAACTTTGGCGGATCCTAGACTAGGAAAGAACTACGATAGAAATGAAATGTTTAGGATGATTGAGGCTGCTGCAGCTTGCGTGCGTCACTCCTCGGTTAAGAGGCCACGGATGAATCAGGTTATGAGAGCTTTCGATTCCATGGACGAGTCTGCAGATCTGAATAATGGAATGAAACCGGGGCAGAGTTCAGTGTTCGATTCTGCACAGCAATCTGCACAGATAAGAATGTTTAGGAGAATGGCTTTTGGAAGCCAAGATAGTTCCAGTTTCTATAATGAGTCTCAAAGTAGCTATAGGAGTAGAGACCAAGACTCTACAACTATGTTCCCCCAAAATAAATCTCGGTCTTGGAACGCTCGAGATGACTCTTTATAG 2283 0.4569 MASITLSPNASPIALPPSSGAAVLSPPPSPNTSQSNQSSNSPQAVPVTSPPSPSPPQTVPVTSPPSPSISPPPPSNAPPPTSPPSPPASPPPAPVVTAPPPAKTSPSVPNLSPPPPSADSPPPQSSKPPPSQSISPSPPPPPPANVPKPPSSDPPPAPQAKPPKSNTPSPPAPQAKPPKSNTPSPPAPQAKPPKSNTPSPPSHDASPPSVSQSPPSPSTGDPPSASTVVPPPSTLPSTPPSVPSGSAAPPATSLLLPPTNETVPAGGPKVSMPSIPTEKPTARPTVDGSGNIGTSNTPSHSGGLTTGGAVAIGVVASLIVLSLLGMAVWFVQKKKKRKGPRDDSAAPSPFTSSHNSGTLFLKPQSQANFVGSGSGNEYVYSPSEPGGVNSSRSWFTYEELIQATNGFSEQNKLGEGGFGCVYKGLLTDGREVAVKQLKIGGGQGEREFRAEVETISRVHHRHLVSLVGYCISEHQRLLVYDYVPNNTLHYHLHDDKAPVLDWSIRVRVAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDHNFEALVSDFGLAKLALDSNTHVTTRVMGTFGYMAPEYATSGKLTDKSDVYSFGVVLLELITGRKPVDDSQPIGDESLVEWARPLLIEALDNEDFETLADPRLGKNYDRNEMFRMIEAAAACVRHSSVKRPRMNQVMRAFDSMDESADLNNGMKPGQSSVFDSAQQSAQIRMFRRMAFGSQDSSSFYNESQSSYRSRDQDSTTMFPQNKSRSWNARDDSL 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00361 760 PRINTS Proline rich extensin signature 12 33 - -
Tsu04g00361 760 PRINTS Proline rich extensin signature 61 78 - -
Tsu04g00361 760 PRINTS Proline rich extensin signature 40 56 - -
Tsu04g00361 760 PRINTS Proline rich extensin signature 79 104 - -
Tsu04g00361 760 MobiDBLite consensus disorder prediction 287 302 - -
Tsu04g00361 760 ProSiteProfiles Protein kinase domain profile. 407 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g00361 760 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Tsu04g00361 760 MobiDBLite consensus disorder prediction 25 45 - -
Tsu04g00361 760 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 136 730 - -
Tsu04g00361 760 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 136 730 - -
Tsu04g00361 760 Gene3D Transferase(Phosphotransferase) domain 1 483 704 - -
Tsu04g00361 760 Pfam Protein tyrosine and serine/threonine kinase 410 678 IPR001245 GO:0004672|GO:0006468
Tsu04g00361 760 SMART serkin_6 407 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g00361 760 MobiDBLite consensus disorder prediction 722 760 - -
Tsu04g00361 760 MobiDBLite consensus disorder prediction 46 246 - -
Tsu04g00361 760 MobiDBLite consensus disorder prediction 722 754 - -
Tsu04g00361 760 MobiDBLite consensus disorder prediction 1 302 - -
Tsu04g00361 760 ProSitePatterns Protein kinases ATP-binding region signature. 413 435 IPR017441 GO:0005524
Tsu04g00361 760 MobiDBLite consensus disorder prediction 335 357 - -
Tsu04g00361 760 SUPERFAMILY Protein kinase-like (PK-like) 385 679 IPR011009 -
Tsu04g00361 760 Gene3D Phosphorylase Kinase; domain 1 382 482 - -
Tsu04g00361 760 CDD STKc_IRAK 413 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00361 Tsu-Chr4 3354937 3359953 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00361 298 724 Trihelix Transcription Factor Family AT1G70460 58.575 1.82e-177 524
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Tsu04g00361 PK_Tyr_Ser-Thr 7.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00361 - - gmx:100784873 838.18