Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00350 ATGATGGGTGTTGATGATGACATAATAAATGCAAGAATGAAGGCTATTGAAAAAGGGGCTTGTGAATATTGGAGTAAACCGTTGAATGGAAATCATATCAACAACATGTGGCAACATGTTGCAACTATTGAACAACAAGATCAAATTCTTAGAATCTTAGAGGTAAAAACAGGACAAAAAATAATGAAGAGAGATAAAAGTgtaacaaaagaaacaaatgtTTGTGTTCTTGAAAATTATAGTGATAATGATCATTATCAACCTCCAACAAAGAATAATCGTGTATCATGGTCGTCACCAAAACTTCATGAACAATTTCTAAGAGTTGTGAATCAAATTGGCATTGACAAGGCGAAGCCAAAAACAATTGTTGAATTGATGAATGTTCCGGGTTTGACAACAAAGCATGTTGCTAGCCGTTTGCAGCAATTGAGACTTGGTATGAAGAGTCCAAGTAAAAAGACAAAGTTAAAGAAGAAATTGTCAAAAAGTGAAAGGAAAAATTCAAAGCAGGATCAATTTAATGTTCTTAATCCTAATGAAAGCCTTGAAGTTGTTCAGTCAATGTCTGCAAAACAGGACCAAAATGTTGTACTTAATTCAGAAGTCATGCAATGTGATAACAACTTTCATGCACAAGAGCATTGGAAGgtgtttgatgattttgaagttTCCAATATTTTTAGTGACAAAACCAACATGATGCTAGATGATTTATCATCACAATATGATGAAGCATGGTGTTCATCTGAATATGGCACATTTGATTGGTGTTAG 777 0.3218 MMGVDDDIINARMKAIEKGACEYWSKPLNGNHINNMWQHVATIEQQDQILRILEVKTGQKIMKRDKSVTKETNVCVLENYSDNDHYQPPTKNNRVSWSSPKLHEQFLRVVNQIGIDKAKPKTIVELMNVPGLTTKHVASRLQQLRLGMKSPSKKTKLKKKLSKSERKNSKQDQFNVLNPNESLEVVQSMSAKQDQNVVLNSEVMQCDNNFHAQEHWKVFDDFEVSNIFSDKTNMMLDDLSSQYDEAWCSSEYGTFDWC 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00350 258 Gene3D - 89 150 - -
Tsu04g00350 258 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 208 IPR045279 GO:0009736
Tsu04g00350 258 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 92 146 IPR006447 GO:0003677
Tsu04g00350 258 MobiDBLite consensus disorder prediction 148 172 - -
Tsu04g00350 258 SUPERFAMILY Homeodomain-like 91 149 IPR009057 -
Tsu04g00350 258 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 1 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00350 Tsu-Chr4 3226682 3228107 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00350 1 149 Response Regulator Gene Family AT2G01760 34.483 1.46e-20 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Tsu04g00350 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00350 - - mtr:MTR_6g045327 149.828