Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00330 ATGCAAACCACAGAGATTAATACAGCACTCAATTATTTACTCCCAAATTCAATTCCATCATGTAACTACAACATGATCCAAAACACCATACCAAATCCTCAACTTCaaaaatactcaaaccaattcTATGGTTTCAACCAAAACcctcttcaaattcttcaagaCTTCAGTTCACAATCCTCATGCCTAAGTAGCAACTCAACTTCGGACGAAGCGGATGAACAAAATAAAGGACTAATCAATGAAAGAAAACACCGAAGAATGATATCGAACCGCGAGTCAGCGCGTAGGTCGCGAATGaggaaacaaaaacaacttGATGAGCTATGGTCACAAGTTGTTTGGCTAAGGAATGAGAATCATCAACTATTAGATAAGCTTAACAATTTTTCAGAAACTCATGATAGAGTTGTTCAAGAGAATGTTCaattgaaagaagaagcttCGGAACTTCGACAAATGGTTTGTGACATGCAGTTACATAGTTCATGTCTTCCTTTGAGTCCTCTTCAAGATGTTCCTAGCATCACTTCACCTCATGTTAAATCTGATTCCTCAAACCAATCaaactcaagttctgatgattttttaggatga 597 0.3183 MQTTEINTALNYLLPNSIPSCNYNMIQNTIPNPQLQKYSNQFYGFNQNPLQILQDFSSQSSCLSSNSTSDEADEQNKGLINERKHRRMISNRESARRSRMRKQKQLDELWSQVVWLRNENHQLLDKLNNFSETHDRVVQENVQLKEEASELRQMVCDMQLHSSCLPLSPLQDVPSITSPHVKSDSSNQSNSSSDDFLG 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00330 198 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 189 IPR044521 -
Tsu04g00330 198 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 81 144 IPR004827 GO:0003700|GO:0006355
Tsu04g00330 198 Coils Coil 127 154 - -
Tsu04g00330 198 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 86 101 IPR004827 GO:0003700|GO:0006355
Tsu04g00330 198 MobiDBLite consensus disorder prediction 175 198 - -
Tsu04g00330 198 Gene3D - 81 136 - -
Tsu04g00330 198 SUPERFAMILY Leucine zipper domain 83 132 IPR046347 GO:0003700|GO:0006355
Tsu04g00330 198 PANTHER BZIP TRANSCRIPTION FACTOR 1 189 - -
Tsu04g00330 198 Pfam bZIP transcription factor 83 133 IPR004827 GO:0003700|GO:0006355
Tsu04g00330 198 CDD bZIP_plant_GBF1 84 135 IPR045314 GO:0003700|GO:0006355
Tsu04g00330 198 SMART brlzneu 79 143 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00330 Tsu-Chr4 3030261 3030960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00330 31 165 bZIP Transcription Factor Family AT3G30530 63.448 2.58e-49 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu04g00330 bZIP_1 4.8e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00330 - - aprc:113863596 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g02317 06 29395086 29395753 Tsu04g00330 04 3030261 3030960 PCT