Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00327 ATGACAATTGGAAATCTTGCACCTAAGACAGAGAGGAAGAAATCATCAAGAAAGAGCAAGAACAAGGCTGTTGTTAGTGAAAATGCACCTCTGTTGCCTAAATGTCAAGCTGATGAAAGTGATTCTGGATTCGATGATTTCAACGGAGCTTCATTTTCTGGTGCTGTTTTCAACTTGGCAACTACAATTATTGGTGCTGGAATAATGGCTTTGCCTGCAACCTTGAAACAGTTGGGGTTGATTCCTGGTCTTGCTGCTATACTTATCATGGCTTTTTTGACTGAGAAGTCAATTGAGCTTTTGATTAGGTTTACAAGGGCCGGGAAATCTGTTTCATATGCTGGTTTGATGGGTGATTCCTTTGGGAAATATGGAAAAGCTTTGGCACAGATTTGTGTTATTGTTAATAACATTGGTGTGCTGATTGTTTACATGATTATAATTGGTGATGTGCTTTCTGGAACATCATCAAGTGGAGAACATCACTATGGTATCCTTGAAGGATGGTTTGGCGTGCACTGGTGGACCGGACGGACATTTATCGTCCTTCTTACGACGGTTGCTGTATTTGCCCCCCTCGCAAGCTTTAAGCGAATTGATTCGTTGAGATTCACATCTGCCCTTTCCGTTGCACTGGCGGTCGTTTTTCTTGTCATTGCTGTGGGAATTTCTGTTGTGAAGATCATAAGTGGAGGCATTACCATGCCGAGACTCTTCCCAGCTGTTACTGATGCAACATCCATCTTTAACCTATTTACTGTGGTTCCTGTGTTTGTGACTGCTTATATCTGTCACTACAATGTTCACAGCATAGATAATGAGCTTGAGGACAACTCACAGATGCAAGGCGTTGTACGTACTGCCCTCGGTCTATGCTCATCCGTGTACTTAATGATCAGCTTCTTTGGCTTCCTTTTATTTGGCGAAGGAACTCTTGATGATGTGCTTGCCAATTTCGATGCTGATCTTGGAATTCCTTTTGGTTCTTTGCTCAACGATGCTGTTCGTATTAGCTACGCTGCACACCTCATGCTTGTATTTCCAGTTGTCTTTTTTCCATTGCGACTCAATATAGATGGTCTTCTCTTCCCTAAGTCAAGACCTTTGGTTCTAGATAACTTCAGATTTGCATCAATGACTGTTGCCCTTATCGGTGTTATCTTCCTTGGAGCAAATTTCATTCCTAGCATTTGGGATGCTTTCCAGTTCACTGGAGCAACCGCTGCAGTTTGTATTGGGTTCATCTTTCCAGCTGCCATCACTCTTAAGGACCGCTACAACATAGCAACTAAATCGGACAAGATTCTATGTGTCGTTTTGATAATCCTAGCAGTCTTCTCAAACATTGTGGCTATATATAGTGACGCCTATGCATTGATCAAGCAGAACAAAACTAAACGTGAATGA 1407 0.4208 MTIGNLAPKTERKKSSRKSKNKAVVSENAPLLPKCQADESDSGFDDFNGASFSGAVFNLATTIIGAGIMALPATLKQLGLIPGLAAILIMAFLTEKSIELLIRFTRAGKSVSYAGLMGDSFGKYGKALAQICVIVNNIGVLIVYMIIIGDVLSGTSSSGEHHYGILEGWFGVHWWTGRTFIVLLTTVAVFAPLASFKRIDSLRFTSALSVALAVVFLVIAVGISVVKIISGGITMPRLFPAVTDATSIFNLFTVVPVFVTAYICHYNVHSIDNELEDNSQMQGVVRTALGLCSSVYLMISFFGFLLFGEGTLDDVLANFDADLGIPFGSLLNDAVRISYAAHLMLVFPVVFFPLRLNIDGLLFPKSRPLVLDNFRFASMTVALIGVIFLGANFIPSIWDAFQFTGATAAVCIGFIFPAAITLKDRYNIATKSDKILCVVLIILAVFSNIVAIYSDAYALIKQNKTKRE 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00327 468 PANTHER AMINO ACID TRANSPORTER 12 465 - -
Tsu04g00327 468 Pfam Transmembrane amino acid transporter protein 50 454 IPR013057 -
Tsu04g00327 468 MobiDBLite consensus disorder prediction 1 28 - -
Tsu04g00327 468 PANTHER AMINO ACID TRANSPORTER AVT6A 12 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00327 Tsu-Chr4 2986052 2991008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00327 3 467 Amino Acid or Auxin Permease AAAP Family AT3G30390 69.247 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00327 K14207 - gmx:100796345 775.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g02308 06 29292588 29297178 Tsu04g00327 04 2986052 2991008 PCT